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Clone Read LE_HBa0003H02_SP6_53714

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0003H02_SP6_53714
Primer
SP6
ID from Seq. Facility
LE_HBa_003_H02-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
725 trimmed for vector and quality, 770 raw
Genbank Accession
DU079129
Sequence
>LE_HBa0003H02_SP6_53714 (raw untrimmed)
AATAAAATACTGCATATTCTACATTATGTTGTCCTCTGTTCCCACATCATTATGAAGGTTTCAATGACTATTAAAACAGTATTAATATCATTACGACGTG
GTTCACCAAATAAATTAGTATCGTAAAATTAGTACATGATACTTGCCATTGAATAGAGATGTCAAACCTCAAGCACAAGGATAGATTGTGCAGTACTAAA
TAATACTTTTGCTCTAATTTTTTTCTCTTTCATCTATAATGTTGTGTGTTGCTCCAAAGTCCACTAGTACTACATACTCAAACTCATTCCCCCATAGAAC
AAAATTTAAAAGATTGAAACAACATTCGGTGTAAGATTTATCCTTCTTTGATTATTGTAGCGGAACAAAATTCACGAATTAAATAATTTGCTCTAAATTC
AATTTTTGAATCTCAAGGAAAGTGTAAACTTGTTTAATATCAATCTTAAAAAAATAAATGATGTTATTTTTTCTTTTGTTTCTGATATCTTCTCTTTTCT
TTAAGCGTGAAGTATTATTTTCTTTTTCAAAATTGTTTAATGGATCGATCTAAAGAAACTGATTACCATTCATCTGATATATTAATAATCATAACATTTT
TTTCTTTTAATTTAAATGTGTGATAAACTATTATAATGCTTTTAGATTTTCTTATTTAATCATGTCGACAAAATAATTAACTCTTGATTTGACCATAGAT
GTAAAATGAACGTGGGACAACTAATAATAGGATGTGCCCAGTTGGAATTCATCGTAATTTATTTGGAGCA
>LE_HBa0003H02_SP6_53714 (trimmed for quality and cloning vector)
ATATTCTACATTATGTTGTCCTCTGTTCCCACATCATTATGAAGGTTTCAATGACTATTAAAACAGTATTAATATCATTACGACGTGGTTCACCAAATAA
ATTAGTATCGTAAAATTAGTACATGATACTTGCCATTGAATAGAGATGTCAAACCTCAAGCACAAGGATAGATTGTGCAGTACTAAATAATACTTTTGCT
CTAATTTTTTTCTCTTTCATCTATAATGTTGTGTGTTGCTCCAAAGTCCACTAGTACTACATACTCAAACTCATTCCCCCATAGAACAAAATTTAAAAGA
TTGAAACAACATTCGGTGTAAGATTTATCCTTCTTTGATTATTGTAGCGGAACAAAATTCACGAATTAAATAATTTGCTCTAAATTCAATTTTTGAATCT
CAAGGAAAGTGTAAACTTGTTTAATATCAATCTTAAAAAAATAAATGATGTTATTTTTTCTTTTGTTTCTGATATCTTCTCTTTTCTTTAAGCGTGAAGT
ATTATTTTCTTTTTCAAAATTGTTTAATGGATCGATCTAAAGAAACTGATTACCATTCATCTGATATATTAATAATCATAACATTTTTTTCTTTTAATTT
AAATGTGTGATAAACTATTATAATGCTTTTAGATTTTCTTATTTAATCATGTCGACAAAATAATTAACTCTTGATTTGACCATAGATGTAAAATGAACGT
GGGACAACTAATAATAGGATGTGCC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.91879
Expected error %
0.156258
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0003H02
Clone
Clone name
hba-3h2
LE_HBa0003H02
P003H02
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found