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Clone Read LE_HBa0003A06_SP6_53386

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0003A06_SP6_53386
Primer
SP6
ID from Seq. Facility
LE_HBa_003_A06-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
698 trimmed for vector and quality, 796 raw
Genbank Accession
DU078860
Sequence
>LE_HBa0003A06_SP6_53386 (raw untrimmed)
GGATTCTTATGTTTGTACACACTCGTCCGTCACGTATGTAAATATTATTATTTTATTTTTCTAATTAAAAAATATTTTTTTAAAAAAATCTAAAAGATTA
TTTTCATTTTTTTTAAAAAAAATATTCTTATTGTCTTCATTATGTATTTAAATTAAATTAATACACATTTTTTTACCCTGAACGAAACTTTTTTTTCACC
TACAATTTATGTTTTTTCTCTTTTATTTTCTATTATTTTTTATTTTCTTTGTCTTTCATTTGATTTGATTTTAAATAATTCCAAATGTCTTGAATTTTAA
ATAAGTTAATTTTGAACGAATATCAAAATAAGTGAGGAAAATTAAAACAAAACATAAGTAAATTAAACATTGAAATTAAAGGACACTTTTAAATATTTTT
TTAAAAAATTACACATTTCTTTAAAATAATTAAAAGTGAAAATATAATAAATTAGTTTTTTTTAAAAAAAAGGTGAAAAGAAATAATAATAAATATTTTA
CAAAGTAATAAACAAAAATAATTAAATATATATGAGTTTTAATATCAATAAAAATGTGTCCAAACTAATTATAAAGTTATTAATAAAAAAATTACATGTC
TCCAATTTTTGCACTAATCACTTGCCTTCAAGAGAGTGTGTACACTCTCTATGTCATGTCAGTGTTTATGGTACATTTATTCCATTTTTAATTAGTTTTG
AGGAAGGGGGGGGGGGGTAATNNTNNNNNNNTNNNNNNNNNTNTTTTTTTNNTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
>LE_HBa0003A06_SP6_53386 (trimmed for quality and cloning vector)
CTCGTCCGTCACGTATGTAAATATTATTATTTTATTTTTCTAATTAAAAAATATTTTTTTAAAAAAATCTAAAAGATTATTTTCATTTTTTTTAAAAAAA
ATATTCTTATTGTCTTCATTATGTATTTAAATTAAATTAATACACATTTTTTTACCCTGAACGAAACTTTTTTTTCACCTACAATTTATGTTTTTTCTCT
TTTATTTTCTATTATTTTTTATTTTCTTTGTCTTTCATTTGATTTGATTTTAAATAATTCCAAATGTCTTGAATTTTAAATAAGTTAATTTTGAACGAAT
ATCAAAATAAGTGAGGAAAATTAAAACAAAACATAAGTAAATTAAACATTGAAATTAAAGGACACTTTTAAATATTTTTTTAAAAAATTACACATTTCTT
TAAAATAATTAAAAGTGAAAATATAATAAATTAGTTTTTTTTAAAAAAAAGGTGAAAAGAAATAATAATAAATATTTTACAAAGTAATAAACAAAAATAA
TTAAATATATATGAGTTTTAATATCAATAAAAATGTGTCCAAACTAATTATAAAGTTATTAATAAAAAAATTACATGTCTCCAATTTTTGCACTAATCAC
TTGCCTTCAAGAGAGTGTGTACACTCTCTATGTCATGTCAGTGTTTATGGTACATTTATTCCATTTTTAATTAGTTTTGAGGAAGGGGGGGGGGGGTA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.834638
Expected error %
0.0265332
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0003A06
Clone
Clone name
hba-3a6
LE_HBa0003A06
C03HBa0003A06
P003A06
Clone type
BAC
Contamination
none
Estimated length
113,774
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found