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Clone Read LE_HBa0002J01_T7_53041

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0002J01_T7_53041
Primer
T7
ID from Seq. Facility
LE_HBa_002_J01-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
711 trimmed for vector and quality, 771 raw
Genbank Accession
DU078559
Sequence
>LE_HBa0002J01_T7_53041 (raw untrimmed)
CCTGGGTACCGGGGGATCTCTAGAGTCGACCTGCAGGCATGCAAGCTTCACCAGAATCAAGGATAAATACCCGACAATATACTAATAAAAAGTGACTTTA
AAAATGATGGGTGCAATCTTAAATTGTTTCCAATAGGAGGAAAATTAGGACATTTCTTGTGTATAAACGTATTCATATTTATCATATTGTCTTACTCAAA
ATGATATCGTACAAAATTAAGAAAGATGACATCCACGAGAAGCGAAGAAACATTATTTTAATTAGCTCATTCTTTCTAATTAGTATTCAAAACTCCCTAT
AAATAGTCAGGTTAAGTTGGGCAGGTAAAAATCCAAGTGTTAGTCCCCCTATTAACTGAATTTTGCCTGATAACTAAGTAAAATTTTAGTTAAGAGTGGT
TTTAACCAATCCAACATTCTGCCACAAAGAAAAGGACAAAGATGTTCTCAGTGAATTTTCAATTTTACCAAGTATATAAGTCATTATCTCCTGTTATCCT
ATGAGCTATACAATAAACTCAGTTAAAACATCTATTTACATGCAAATAACTCTTTATCCTGGGGGTTAGTTCCACATAGCCAAGCAATTGGGAATGTATG
ACATATTATCCAATTGAGAAACAAATGTCAATTCTCACAGTTCAAGCAAAGTAACTAACCTGGTCCAAGGTACAGCATTTCCTAATGAGGGGACCGACAG
GGAAGTCTTCATTCAATTGTTCTTTTAAATTCCTTAATTCCCTCTCTGCTTCTGAGAGCCCCTCGGAATCC
>LE_HBa0002J01_T7_53041 (trimmed for quality and cloning vector)
AGCTTCACCAGAATCAAGGATAAATACCCGACAATATACTAATAAAAAGTGACTTTAAAAATGATGGGTGCAATCTTAAATTGTTTCCAATAGGAGGAAA
ATTAGGACATTTCTTGTGTATAAACGTATTCATATTTATCATATTGTCTTACTCAAAATGATATCGTACAAAATTAAGAAAGATGACATCCACGAGAAGC
GAAGAAACATTATTTTAATTAGCTCATTCTTTCTAATTAGTATTCAAAACTCCCTATAAATAGTCAGGTTAAGTTGGGCAGGTAAAAATCCAAGTGTTAG
TCCCCCTATTAACTGAATTTTGCCTGATAACTAAGTAAAATTTTAGTTAAGAGTGGTTTTAACCAATCCAACATTCTGCCACAAAGAAAAGGACAAAGAT
GTTCTCAGTGAATTTTCAATTTTACCAAGTATATAAGTCATTATCTCCTGTTATCCTATGAGCTATACAATAAACTCAGTTAAAACATCTATTTACATGC
AAATAACTCTTTATCCTGGGGGTTAGTTCCACATAGCCAAGCAATTGGGAATGTATGACATATTATCCAATTGAGAAACAAATGTCAATTCTCACAGTTC
AAGCAAAGTAACTAACCTGGTCCAAGGTACAGCATTTCCTAATGAGGGGACCGACAGGGAAGTCTTCATTCAATTGTTCTTTTAAATTCCTTAATTCCCT
CTCTGCTTCTG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.941077
Expected error %
0.241499
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0002J01
Clone
Clone name
hba-2j1
LE_HBa0002J01
P002J01
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found