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Clone Read LE_HBa0002I05_SP6_53000

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0002I05_SP6_53000
Primer
SP6
ID from Seq. Facility
LE_HBa_002_I05-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
757 trimmed for vector and quality, 812 raw
Genbank Accession
Sequence
>LE_HBa0002I05_SP6_53000 (raw untrimmed)
GTTTTTCTGGTTGTGACTTGAGAGCTTACCTTGCCTGAGAAAGAAAGGAACTGAAGAAGACGGAAACGGGGGACATTGACAGGTTCAGGTAAAATTAGAA
GGGTATGAACTCGGCCCGTGTGTGTCTTTTCATTCTTGGGCCGGGCTGATTTCGCGGCCCACGTAGCTTGCGTTTGGAATGTGATATGAAGTCTCAGGTA
AGATTTCAAATCACAATCTCAAATTCTTGAAAAAGCATGAAAATCATTAATCATCCACATCAATGTTGCTTTCAAGAGAAAATTTTGCTTCTTGGATTTG
TCATAAGTTAGTGCACCGTCCTTCCAACATCAATAGTAATCCTGATTTTGTGCGGGTCGCTTAGCTGAAAGAATGGAGTAAGGGCAGTATTATGCATGGG
AACGTGGATCTTCAGAATCAACATGTGCTGGCTTAACTAGCAGAATTGAAGAAAATCCAAAATCACAGGTCTCAGTGGGAAGATGATTTAGTTGCAAGAA
TGCCCGAGTTTGAAGAGATTACTTGAAGACAAAGATCTAGGGCGACATGGCTTAAGGCGCTCTTGAGCCTCATGGACAATATCAGAGTTTGTGCTCCCAC
GTCCAAATGGGGATTTCCTCCAAACACGGTTGGGAAATTGACTTGGTAGAATTTTATTTACTGTACTAAAACCCATTACAAAATTTGGTTATAAAATTTT
AAAACCTTGGAGAAAGAGTAAAAGATGGTAACGAACTAACAGTTAAAGAGCTTTATCTCTTACTCCATCCATATTACCTACATTAGTTAGGACACCTGAG
TCTTTGGTTCTC
>LE_HBa0002I05_SP6_53000 (trimmed for quality and cloning vector)
TTGTGACTTGAGAGCTTACCTTGCCTGAGAAAGAAAGGAACTGAAGAAGACGGAAACGGGGGACATTGACAGGTTCAGGTAAAATTAGAAGGGTATGAAC
TCGGCCCGTGTGTGTCTTTTCATTCTTGGGCCGGGCTGATTTCGCGGCCCACGTAGCTTGCGTTTGGAATGTGATATGAAGTCTCAGGTAAGATTTCAAA
TCACAATCTCAAATTCTTGAAAAAGCATGAAAATCATTAATCATCCACATCAATGTTGCTTTCAAGAGAAAATTTTGCTTCTTGGATTTGTCATAAGTTA
GTGCACCGTCCTTCCAACATCAATAGTAATCCTGATTTTGTGCGGGTCGCTTAGCTGAAAGAATGGAGTAAGGGCAGTATTATGCATGGGAACGTGGATC
TTCAGAATCAACATGTGCTGGCTTAACTAGCAGAATTGAAGAAAATCCAAAATCACAGGTCTCAGTGGGAAGATGATTTAGTTGCAAGAATGCCCGAGTT
TGAAGAGATTACTTGAAGACAAAGATCTAGGGCGACATGGCTTAAGGCGCTCTTGAGCCTCATGGACAATATCAGAGTTTGTGCTCCCACGTCCAAATGG
GGATTTCCTCCAAACACGGTTGGGAAATTGACTTGGTAGAATTTTATTTACTGTACTAAAACCCATTACAAAATTTGGTTATAAAATTTTAAAACCTTGG
AGAAAGAGTAAAAGATGGTAACGAACTAACAGTTAAAGAGCTTTATCTCTTACTCCA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.976915
Expected error %
0.18038
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0002I05
Clone
Clone name
hba-2i5
LE_HBa0002I05
C02HBa0002I05
P002I05
Clone type
BAC
Contamination
none
Estimated length
128,934
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found