Clone Read LE_HBa0065N07_T7_50173

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0065N07_T7_50173
Primer
T7
ID from Seq. Facility
LE_HBa_065_N07-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
572 trimmed for vector and quality, 904 raw
Sequence
>LE_HBa0065N07_T7_50173 (raw untrimmed)
ACTGGCTGGGTACCCGGGGGTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTACGTTAATTTAATTGTGAGGTTGCATGGGGTTCCTTTGTACATCAT
CTTATAGATGTCCTTATTTGATCTCTCATTTATGGAAGTAATTTCCGAAGGGTCTTGGTACTCATGTTAACCTTAGCATAATATTTCATCTGCAAATAGA
TGGACAGGCAGAGCGTACCATTCAAACCCTATAGGACATATTTATGGCTTGTGTTATCGATTTCAAGGCTAATTGAGATGATAACCTTACTCTTATTCAA
TTCTACTACAATAATAGCTACCCTTCTTTGAGGCACTGTATCGGTGTGGATGTACATCTCATGTTGGTTGTTTTGAATTAGGTGAAGGACTTGTGATATA
ATCTAATTTAGTCCATTATGCTGCAGACAAAGTGCAACTCATTAAAGATAGACTTAAGATAGGCCAGAATCATAATGAATCTTATGCAGATGTAAGGACA
AGGGAACTAGATTTCCCAGTCCATGATTAAGTTTTCCTGAAAGTGTCACCTATGATGGAGGTGATCAGGTCTGGCAAGGGATAGAATCTCGTTACTATTT
CTGTAGGCACTTACAATATCTAGTGAAAGGTTGCAATCTTATGGTATGGGTGGTAAATGTCCACGGAACTACATCCCATAACCTCCAAATTACTAAAACC
CACTCTTTAAGACGTGCATGGGGTATTGTTACCCCTTAGATGCCACAGAAAGCAGAGCAGCTGATACTCATGGTCCTGTTACCACGAAAAAAGGATTGAA
TCCTACCCGATTTGGAGTGAAGGCACCCATCCACACTAACGGATCCGTCCAAGGGTTGAGATGGAGAACTTTAATCTGTGTATACATCATCGCTTATTTT
GGAA
>LE_HBa0065N07_T7_50173 (trimmed for quality and cloning vector)
AGCTTTACGTTAATTTAATTGTGAGGTTGCATGGGGTTCCTTTGTACATCATCTTATAGATGTCCTTATTTGATCTCTCATTTATGGAAGTAATTTCCGA
AGGGTCTTGGTACTCATGTTAACCTTAGCATAATATTTCATCTGCAAATAGATGGACAGGCAGAGCGTACCATTCAAACCCTATAGGACATATTTATGGC
TTGTGTTATCGATTTCAAGGCTAATTGAGATGATAACCTTACTCTTATTCAATTCTACTACAATAATAGCTACCCTTCTTTGAGGCACTGTATCGGTGTG
GATGTACATCTCATGTTGGTTGTTTTGAATTAGGTGAAGGACTTGTGATATAATCTAATTTAGTCCATTATGCTGCAGACAAAGTGCAACTCATTAAAGA
TAGACTTAAGATAGGCCAGAATCATAATGAATCTTATGCAGATGTAAGGACAAGGGAACTAGATTTCCCAGTCCATGATTAAGTTTTCCTGAAAGTGTCA
CCTATGATGGAGGTGATCAGGTCTGGCAAGGGATAGAATCTCGTTACTATTTCTGTAGGCACTTACAATATC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.953272
Expected error %
1.31279
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38792.1| Score 91 E Value 2e-35 Identity 50.00% Align. Length 472bp (82.52%) Frame 2
putative gag-pol polyprotein [Solanum demissum] gb|AAT38791.1| putative gag-pol polyprotein [Solanum demissum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38790.1| Score 91 E Value 2e-35 Identity 50.00% Align. Length 472bp (82.52%) Frame 2
putative gag-pol polyprotein [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0065N07
Clone
Clone name
hba-65n7
LE_HBa0065N07
C03HBa0065N07
P065N07
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found