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Clone Read LE_HBa0063E22_SP6_48234

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0063E22_SP6_48234
Primer
SP6
ID from Seq. Facility
LE_HBa_063_E22-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
725 trimmed for vector and quality, 945 raw
Sequence
>LE_HBa0063E22_SP6_48234 (raw untrimmed)
AAATAAAAATGGTTTNCTTTNCCTAGTGTANNGTANGCTANTCNNANGAACTTTTATAGTGTAGCATTTACTATCTCTTAGGCATTAGAGTAGTATAAAT
AGTAGTTCATTTGACTTGTAAAGCATCAAATCATTTTTCAAGTAATAGAAGTTCCTTCTTCCAAAATTCTGTCTACTTCTTATTTTCTTAGCGATCCGAG
TTTTAGGCATACTTGAGTTTGCAAGAACGTGCAAGAATCGTGAGTAAACCGTCAAGTGCCGCACGGAGTATTGTCCGAATCAAAATGTCTGTGACAAAGG
GCTATGATGGCATGCCACGCCAAACATCGTTCGACCGTGTGTGCTGTCCCAAGGCGGTGATGTCATGCCACGCCCAACGTTATCGACCGTGTGTGTAGTC
TAAGGGCGAAGATGTCATGCCATGCCCAACGTCGTCCAACCGTGTGTGTAGTCCAAGGGCGGTAATGTACTGCTACGCGCGACATCGTTCAACATGTGTG
TTGTCTAAGGGCGGTGATGTCATGCCATGTCGAACGTCGTCCGACCGTGCGTGCAGTCCAAAAGCGGTGATGTCATGCAACGCCCAACGTCATTTGACCG
TGCATGCAGTCCAAGGGCGGTGATGTCATGCCATGCTCGATGTCGTTCGACCGTTTGTGCTGCCTAAAGGCGATGATGGCATGCTACGCCCGACGTCGTT
CGACCATGTGTGCTGCCCAAATGCAATGATGGCATGCCACACCCGACATCCTTCGACCGTGTGTGCTGTCTAAAGGCGGTGATGGAATGTCACACCTTGA
CGTCGTTCGACCGTGTGTGCTGTCCAAAGGGGGGGAAGTCAAGCCACACCCGACGTCTTTTGACTGTGTGTGTTGCCCAAAGGCGGTGAAGGGCAGTAAC
ACCCGACGTTTTTTACCGTGTGTGGTGGCAAAAAACAAGGATGCA
>LE_HBa0063E22_SP6_48234 (trimmed for quality and cloning vector)
ACTTTTATAGTGTAGCATTTACTATCTCTTAGGCATTAGAGTAGTATAAATAGTAGTTCATTTGACTTGTAAAGCATCAAATCATTTTTCAAGTAATAGA
AGTTCCTTCTTCCAAAATTCTGTCTACTTCTTATTTTCTTAGCGATCCGAGTTTTAGGCATACTTGAGTTTGCAAGAACGTGCAAGAATCGTGAGTAAAC
CGTCAAGTGCCGCACGGAGTATTGTCCGAATCAAAATGTCTGTGACAAAGGGCTATGATGGCATGCCACGCCAAACATCGTTCGACCGTGTGTGCTGTCC
CAAGGCGGTGATGTCATGCCACGCCCAACGTTATCGACCGTGTGTGTAGTCTAAGGGCGAAGATGTCATGCCATGCCCAACGTCGTCCAACCGTGTGTGT
AGTCCAAGGGCGGTAATGTACTGCTACGCGCGACATCGTTCAACATGTGTGTTGTCTAAGGGCGGTGATGTCATGCCATGTCGAACGTCGTCCGACCGTG
CGTGCAGTCCAAAAGCGGTGATGTCATGCAACGCCCAACGTCATTTGACCGTGCATGCAGTCCAAGGGCGGTGATGTCATGCCATGCTCGATGTCGTTCG
ACCGTTTGTGCTGCCTAAAGGCGATGATGGCATGCTACGCCCGACGTCGTTCGACCATGTGTGCTGCCCAAATGCAATGATGGCATGCCACACCCGACAT
CCTTCGACCGTGTGTGCTGTCTAAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.976588
Expected error %
0.0473254
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0063E22
Clone
Clone name
hba-63e22
LE_HBa0063E22
C02HBa0063E22
P063E22
Clone type
BAC
Contamination
none
Estimated length
120,670
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found