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Clone Read LE_HBa0061J21_T7_47705

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0061J21_T7_47705
Primer
T7
ID from Seq. Facility
LE_HBa_061_J21-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
5 trimmed for vector and quality, 804 raw
Sequence
>LE_HBa0061J21_T7_47705 (raw untrimmed)
GCATCTGCAAGGAATAGATAGGCGGAGCATCTTTCTTTCATTTTCAATTGTTACTGTACGTTGCTTTTGTTATACTTCCGCTTTGGTCGCCTACGTCCGG
GACACCTATCACATTCGTTGTTAGATCCGGCGCGAAGGCTCAGGGGGCTCATACTTCTGCGCACCATCCATATTGACTCGAGTGCTACTCCACAGTGCGC
TAATTCTGTCGCTATAATGTGTTTATCTTCGGTGGTGTAGAGAGGGGTGGGCCGTNGTCTGACTCGGGTCTGTCTAAGACTCTCAATTTCACTCGACTTG
AACCACGACTCCGCCCGGCTTTCCGTATCCTTCCTCACATCTTAATCCCACATTACTGTATTTTTGTTTTGTTGGACGTGAGTTCCATTTTGCGGGCGTA
GATTGTAAATCTT
TTTTTTTTCCCCCCCCTCATAGTGCTTGACTATTTCTATAAAAAAAGTTGTTAATGTTTAAACTGTGACCGACATATAAGATATTTC
ATCAAGTAGGCAAAGATATCTTTCTTAGAATTTCTCGGAACTACTCGCTCATCTCTCTAATATAGATTATATAATAGTGACTGTTCATCTCAAGTTGTGC
TTCATGTCCTTCGTTATATTTTTCTTTTGTTTCTCTGTTACTTTATCTTCATGTCTGTGTTTGTACTGCCTCTATTTTTGGCTTCTATACACTTGCCTAA
TTTCGTTTCCGCTTCTCTTCCACTCCTGACGTAATCGAGTTGACAGGCGTGAGGAATAGCGTGTGCTTGTCTGTTCATAAAAATTTCACCCATAGCCAGC
GCCA
>LE_HBa0061J21_T7_47705 (trimmed for quality and cloning vector)
TTTTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.44518
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0061J21
Clone
Clone name
hba-61j21
LE_HBa0061J21
C12HBa0061J21
P061J21
Clone type
BAC
Contamination
none
Estimated length
135,233
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found