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Clone Read LE_HBa0061A01_SP6_47232

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0061A01_SP6_47232
Primer
SP6
ID from Seq. Facility
LE_HBa_061_A01-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
642 trimmed for vector and quality, 841 raw
Sequence
>LE_HBa0061A01_SP6_47232 (raw untrimmed)
TTTCCCTCCTTTCGTACTCTTCCTTCTTGATCGAGCGTTTCTCCTTCTCTCTGTTCTTTCTATTTTTCTTATTCCAACCCTTTTTCTTTTACCCTAATTA
GCATATAATTAAGTATAAAAGATGACAAAAGTAACCCACTAATTAATTTAAGGTTATCTCCTTTAACCCTCAAGAAATTGGATTATTAATATTCAACCAC
TAACTTTATAATTATAAGCAGAAATAGTCCAAAACGCCCCTTAAAATATTAAACAGAAATCCGACCCAGCCTGGGATTACGAAGTCTGTGACGGCTCGTC
GTGCCTGCGACGGTCCGTCCTTCTGCTTCCGTCACAAATTTCAGAGACTAAATTTCACTAAAGGATCTGTGACGGCCCATCACGCCTGTGACGGTCCGTC
CTGCCATTCCGTCACGAAGTTCAGAGAGTCGATTTCAGTATCCAAAATTCAGAATTCTAAGTGTTTTGGAACGAGACCCCCTCAACGGTCCGTCGTGCCC
ATGACGGTCCGTCGTGGGATCCGTCGTCTCAGCCAGTTTTTCCAAAAATAAAATTTGCTGCTCAAAACGACTAACAAGTCGTTACACTTATGCTTAAATT
TAATAAGAAATGTAAGTATTTATTTCCTTTGTTATAAAAAATGAAAGAATATAATCTAAGTTTTCTTGCCGAAAATAATGGACATCACCTTTTTTATTTT
GCCGAAAAATATGGAAGGCCCCCCGGAAATATAGAGTTCACACCCACAGCTTCAGGTTCACACCCCCTTCTTTCTTCATTACAAACCAGGACCTTAAATA
AATTTAAATCCAAACAAAAAGAAACCGAACCTATTCTTTTN
>LE_HBa0061A01_SP6_47232 (trimmed for quality and cloning vector)
TGATCGAGCGTTTCTCCTTCTCTCTGTTCTTTCTATTTTTCTTATTCCAACCCTTTTTCTTTTACCCTAATTAGCATATAATTAAGTATAAAAGATGACA
AAAGTAACCCACTAATTAATTTAAGGTTATCTCCTTTAACCCTCAAGAAATTGGATTATTAATATTCAACCACTAACTTTATAATTATAAGCAGAAATAG
TCCAAAACGCCCCTTAAAATATTAAACAGAAATCCGACCCAGCCTGGGATTACGAAGTCTGTGACGGCTCGTCGTGCCTGCGACGGTCCGTCCTTCTGCT
TCCGTCACAAATTTCAGAGACTAAATTTCACTAAAGGATCTGTGACGGCCCATCACGCCTGTGACGGTCCGTCCTGCCATTCCGTCACGAAGTTCAGAGA
GTCGATTTCAGTATCCAAAATTCAGAATTCTAAGTGTTTTGGAACGAGACCCCCTCAACGGTCCGTCGTGCCCATGACGGTCCGTCGTGGGATCCGTCGT
CTCAGCCAGTTTTTCCAAAAATAAAATTTGCTGCTCAAAACGACTAACAAGTCGTTACACTTATGCTTAAATTTAATAAGAAATGTAAGTATTTATTTCC
TTTGTTATAAAAAATGAAAGAATATAATCTAAGTTTTCTTGC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.965475
Expected error %
0.144986
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0061A01
Clone
Clone name
hba-61a1
LE_HBa0061A01
P061A01
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found