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Clone Read LE_HBa0059C19_T7_46597

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0059C19_T7_46597
Primer
T7
ID from Seq. Facility
LE_HBa_059_C19-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
762 trimmed for vector and quality, 937 raw
Sequence
>LE_HBa0059C19_T7_46597 (raw untrimmed)
ATTAACTGGGTCCCGGGGGGACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTAACTTTGTCATTCCGCATTAACACACAACCAAATCCAACTTTGGAC
GCATCACAATATAACAAAAACGTTGAGTACCTTATGGTAAATTCAATACAAGGGAAGTAACCAATTACTTGTTTCAATACATGAAAGCTTTTCTCACAAG
CTTCATACCATTAAGACTTAACTATCTTCTAAGTGAACCAGGTCAAAGGGGACGAAATAGATAAGAACCCCTCTACGGACCATCTATAATATCCATCTAA
CCCTAAGAAACTCCTAATATCAGTTGGAGATGTAGGTCTAGGTTAATTCTCCCCTTCCTCTATTTTCTGGGTATCAACTCTAATCCCATCACTGGAAATA
ATGTGGCCTACAAATATAAAAGACTCAAGATAAAACTCACAGTTAGAGAACTTGACATACAACTCTCTATCTTTTAGAGTTTGGAGAGACATTGCAATAT
AACTAGCATGATCTTCCTCACTCCGCGAATAGATTAAAATGTCATCAAAGAAAACGATTAGAGGCATATCTATATAAGGCTTGTATATTCTATTGATAAG
GTCCATGAATGATGTAGGCATATTGGTTAAGCCGAATGACATGACAAGAAACTCATAATGATCATAACGGGTCTTGGAAGATGCCTTTGGAATATCACAT
TCCCTTACCCTCAACTGATGGTACCCTAATTTAAGGTTTATTTTCAAAAAACAAGTGGCACGCTGAAGCTAATAAAAAAGTTATCAGTTCTCAGAAGAGG
ATACTTATTTTTGATGGTAACCTTGTTCAATGATGGAATCTATACGATCCTAAGGAAACCATCCTTGTTTACACAAATAAAATGGAGAACCCCAGGTGAA
ACATTTGTCAAAAAAACCTTCTGTAGAAGTATTTGAT
>LE_HBa0059C19_T7_46597 (trimmed for quality and cloning vector)
AGCTTTAACTTTGTCATTCCGCATTAACACACAACCAAATCCAACTTTGGACGCATCACAATATAACAAAAACGTTGAGTACCTTATGGTAAATTCAATA
CAAGGGAAGTAACCAATTACTTGTTTCAATACATGAAAGCTTTTCTCACAAGCTTCATACCATTAAGACTTAACTATCTTCTAAGTGAACCAGGTCAAAG
GGGACGAAATAGATAAGAACCCCTCTACGGACCATCTATAATATCCATCTAACCCTAAGAAACTCCTAATATCAGTTGGAGATGTAGGTCTAGGTTAATT
CTCCCCTTCCTCTATTTTCTGGGTATCAACTCTAATCCCATCACTGGAAATAATGTGGCCTACAAATATAAAAGACTCAAGATAAAACTCACAGTTAGAG
AACTTGACATACAACTCTCTATCTTTTAGAGTTTGGAGAGACATTGCAATATAACTAGCATGATCTTCCTCACTCCGCGAATAGATTAAAATGTCATCAA
AGAAAACGATTAGAGGCATATCTATATAAGGCTTGTATATTCTATTGATAAGGTCCATGAATGATGTAGGCATATTGGTTAAGCCGAATGACATGACAAG
AAACTCATAATGATCATAACGGGTCTTGGAAGATGCCTTTGGAATATCACATTCCCTTACCCTCAACTGATGGTACCCTAATTTAAGGTTTATTTTCAAA
AAACAAGTGGCACGCTGAAGCTAATAAAAAAGTTATCAGTTCTCAGAAGAGGATACTTATTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.957106
Expected error %
0.424191
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38792.1| Score 320 E Value 3e-86 Identity 21.90% Align. Length 731bp (95.93%) Frame 2
putative gag-pol polyprotein [Solanum demissum] gb|AAT38791.1| putative gag-pol polyprotein [Solanum demissum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38790.1| Score 320 E Value 3e-86 Identity 21.90% Align. Length 731bp (95.93%) Frame 2
putative gag-pol polyprotein [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0059C19
Clone
Clone name
hba-59c19
LE_HBa0059C19
C04HBa0059C19
P059C19
Clone type
BAC
Contamination
none
Estimated length
108,160
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found