Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0059A05_SP6_46472

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0059A05_SP6_46472
Primer
SP6
ID from Seq. Facility
LE_HBa_059_A05-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
698 trimmed for vector and quality, 836 raw
Sequence
>LE_HBa0059A05_SP6_46472 (raw untrimmed)
TTTAAACCACTCTCTNCCGTNNCCACGAAACTCTTAGGAAATTATTCATTGGTTTNTGGACCTAAAGTAAACTAGGAGGATTCATTCTAGTGAAAGCCCT
CAGTCTGCAAGCCATGGTGCTAGCATGTGGGTTCTCCCTGTGAGCAGCATCTCTAGTGGGATGGGGCTGTGATAACATGTGCCTAAGTAGTGATTGCTTG
GGCCATTTGAACTAGTGCTTATCTTACTTGTCCATTTGTCAACGCAGCTGGGTTAAAAGACACTTGTACTGCAATAGCTAGGGTTTGAGAAGGAGCTTGG
TTTCCCCAAGTAGCTGCTCCTTGAAATATCTTGCTTGCGTTTCTCCTCGTATTCATTTTTCTACACTCACACACAAGAAGGATGTTAGATGCTAAAATAA
TACATAATGTCACAACTCTACACATCATAATAAAGAGTAGAAGAAGGGAGGTTTCTTATCATCACTTAGTCTCTAAGTCATGATTGTGGCGCGCTTAAGA
ACCATAAGCTAGAAACTATGTAACGTGCTTATTTTGAGCTTTAGTTCCTAGCTAATTTAATCTCATGCTTTGAAAAGAAGTTTGTCACACCCAGATTCTA
TAATCTGAATACAACCAGCGTTTTTAACCACTCATAGGTCGTATACATGCCTCTTCTTAGCCTTCATCACATTCATATGGTTAAATTTGCGGAGAATTTA
AAACTTTTAAAACGTAATTAAGTGTGCATAGACTTCATATAAAATTTACATGGATTCCCATACTATCAGCTTAAAATAAAAAACCATCTACAATCGATTA
AGCAATTTAAATGAAAGAATTTTTGATATATCATAT
>LE_HBa0059A05_SP6_46472 (trimmed for quality and cloning vector)
GACCTAAAGTAAACTAGGAGGATTCATTCTAGTGAAAGCCCTCAGTCTGCAAGCCATGGTGCTAGCATGTGGGTTCTCCCTGTGAGCAGCATCTCTAGTG
GGATGGGGCTGTGATAACATGTGCCTAAGTAGTGATTGCTTGGGCCATTTGAACTAGTGCTTATCTTACTTGTCCATTTGTCAACGCAGCTGGGTTAAAA
GACACTTGTACTGCAATAGCTAGGGTTTGAGAAGGAGCTTGGTTTCCCCAAGTAGCTGCTCCTTGAAATATCTTGCTTGCGTTTCTCCTCGTATTCATTT
TTCTACACTCACACACAAGAAGGATGTTAGATGCTAAAATAATACATAATGTCACAACTCTACACATCATAATAAAGAGTAGAAGAAGGGAGGTTTCTTA
TCATCACTTAGTCTCTAAGTCATGATTGTGGCGCGCTTAAGAACCATAAGCTAGAAACTATGTAACGTGCTTATTTTGAGCTTTAGTTCCTAGCTAATTT
AATCTCATGCTTTGAAAAGAAGTTTGTCACACCCAGATTCTATAATCTGAATACAACCAGCGTTTTTAACCACTCATAGGTCGTATACATGCCTCTTCTT
AGCCTTCATCACATTCATATGGTTAAATTTGCGGAGAATTTAAAACTTTTAAAACGTAATTAAGTGTGCATAGACTTCATATAAAATTTACATGGATT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.970842
Expected error %
0.0608091
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0059A05
Clone
Clone name
hba-59a5
LE_HBa0059A05
C12HBa0059A05
P059A05
Clone type
BAC
Contamination
none
Estimated length
97,922
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found