Clone Read LE_HBa0009P18_T7_4595

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0009P18_T7_4595
Primer
T7
ID from Seq. Facility
LE_HBa_009_P18-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
734 trimmed for vector and quality, 898 raw
Genbank Accession
DU024510
Sequence
>LE_HBa0009P18_T7_4595 (raw untrimmed)
ATGGGGTCCCCGGGGTTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTATGCCAAATTCTCTAAGTGTGACCTTTTAGAGGATTNAGTGTNNTTNTTG
GGGNANGTAGTTTCCATGGATGGAGTGATGGTGAATCCTTCTAAGATTGAAGCAGTGAAGAGTTGGGTAAAACCTACTAATGTTACAAAGGTAAGGAGTT
TTATTGGTTTAGCTAGATACTACCGTCGATTCGTCAAGGGATTTTCTTCTATTGCTTCCCAACTGACAAACCTGACTAAGCAAAGTGTTCCGTTTGTATG
GTCGTACGAGTGTGAAGAAAGCTTTCAGAAGCTCAAGACTTTGTTGACTACTGCACCGATTCTTACCCTGCAAGTGGAAAGTAAGAATTTCATTGTTTAT
TGTGATGTATCCTATTCTGGGTTGGGTACAGTGTTAATGCAAGAGAAGAATGTGATTGCTTATGCTTCGAGGCAATTAAAGGTGCATGAACGTAATTATC
CGATCCACGATTTGGAGTTAGCGGCGGTAGTGTTTGCGTTAAAGCATTGGAGACATTATCTATATGGGGTTAAATGTGACGTCTATACGGATTATCGTAG
TTTACAGTATGTCTTTACTTAGAAAGATTTGAATTTGAGATAGAGGAGGTGGATGGAACTACTGAAGGACTATGATATCACTATCTTGTATCATCCGGGA
AAAGCTAATGTTGTGGCAGATGCTTTAAGTAGAAAGGCAGGGAGCATGGGAAGTCTAGCCCACTTGCAGGTTTCTAGACGCCCATTGGTCTAGGGAGGTC
AGACTCTGGCCTAATGCCCCTATAAGGCTAGAAGTAAAATGAAAAAGGGGAGGATTTTCGGGTCTGGTTTGGAAGGCAAAATCTTTCCTTTATTTGAN
>LE_HBa0009P18_T7_4595 (trimmed for quality and cloning vector)
AGCTTTATGCCAAATTCTCTAAGTGTGACCTTTTAGAGGATTNAGTGTNNTTNTTGGGGNANGTAGTTTCCATGGATGGAGTGATGGTGAATCCTTCTAA
GATTGAAGCAGTGAAGAGTTGGGTAAAACCTACTAATGTTACAAAGGTAAGGAGTTTTATTGGTTTAGCTAGATACTACCGTCGATTCGTCAAGGGATTT
TCTTCTATTGCTTCCCAACTGACAAACCTGACTAAGCAAAGTGTTCCGTTTGTATGGTCGTACGAGTGTGAAGAAAGCTTTCAGAAGCTCAAGACTTTGT
TGACTACTGCACCGATTCTTACCCTGCAAGTGGAAAGTAAGAATTTCATTGTTTATTGTGATGTATCCTATTCTGGGTTGGGTACAGTGTTAATGCAAGA
GAAGAATGTGATTGCTTATGCTTCGAGGCAATTAAAGGTGCATGAACGTAATTATCCGATCCACGATTTGGAGTTAGCGGCGGTAGTGTTTGCGTTAAAG
CATTGGAGACATTATCTATATGGGGTTAAATGTGACGTCTATACGGATTATCGTAGTTTACAGTATGTCTTTACTTAGAAAGATTTGAATTTGAGATAGA
GGAGGTGGATGGAACTACTGAAGGACTATGATATCACTATCTTGTATCATCCGGGAAAAGCTAATGTTGTGGCAGATGCTTTAAGTAGAAAGGCAGGGAG
CATGGGAAGTCTAGCCCACTTGCAGGTTTCTAGA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.986539
Expected error %
2.18619
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38745.1| Score 355 E Value 7e-97 Identity 23.70% Align. Length 725bp (98.77%) Frame 1
putative polyprotein, 3'-partial [Solanum demissum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT66771.1| Score 354 E Value 1e-96 Identity 23.70% Align. Length 725bp (98.77%) Frame 1
putative polyprotein [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0009P18
Clone
Clone name
hba-9p18
LE_HBa0009P18
P009P18
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found