Clone Read LE_HBa0053P23_T7_44157

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0053P23_T7_44157
Primer
T7
ID from Seq. Facility
LE_HBa_053_P23-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 734 raw
Sequence
>LE_HBa0053P23_T7_44157 (raw untrimmed)
GGGGGAGATGTGCCTCTTTCACACTTGACTCACACGCAACCCCCCCTAATAGGGGGACACGGGGAATCCCACTCAAGGGGGATCTCAGGGAGGGTAGAGT
GTAAAGACCTTGCCACCACACCCCTGCGGAAAGCGCCACATGCACAATAAAGAAAAGGACATGAGGTATTGTCCGTATCCTGTGTCCCTCGCATAGTCCA
ATTGCGTTGCGCCAGGAGCTGACTGGTCACGACCTTGCCCCTGTCTGACTGTCCGCTGTCCATGACCATTCCCGCACATCTTCGCCCGGCGGGTAAGTCA
TCATATTTGACTCCCAACGGTGATTGACCACTCGCCCGTACAACAAGGCCATATCGAAAGGCCTATAGCGACGCCAAGGCGGACGGACAACTGGTGTACG
ATTGTGGCGCCCCGCCGGGCGTGCTTTATGTCCGGGTGACATGGGCGCGACGGAGTGTGCGATGTGATCGGGCATGGTGCAGTTNTGCTCGCCTGTGTTC
GCTGCTCTGCCTCGCTTTATTCATGTGTAGCCTCTACCCCGCGGGCTGCGATGCCTGCCCCGATCGATTATTCCCCTCTTTCACCTTCATCTCTCTACTC
CTTCTCCTTCTGTCCTTTAATCTTCTCTTTTCTCTTCTTTTTCTTACCGCTCTCGTCTTTACACTTTTTCTTTTATTATCTTCTGGGTTTCTTCACTTCA
CGCTCTCGCCCCTCTTCCCTCTCTCTGCCCCCCC
>LE_HBa0053P23_T7_44157 (trimmed for quality and cloning vector)
AAGAAA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.3065
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0053P23
Clone
Clone name
hba-53p23
LE_HBa0053P23
P053P23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found