Clone Read LE_HBa0041L02_SP6_43154

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0041L02_SP6_43154
Primer
SP6
ID from Seq. Facility
LE_HBa_041_L02-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
587 trimmed for vector and quality, 793 raw
Genbank Accession
DU059430
Sequence
>LE_HBa0041L02_SP6_43154 (raw untrimmed)
TTTTCCCCTTGCCTCCCCAAGGATTTTTGGAATGATTCTCTGAACATGAAGAATATGCAGTTGCAAGAATGGACCAGTTTGATCTACCCTTGCTATGTAG
CTCAGAGGAGCAAGATCTTCTGGAAGATCTTAATCCTGAGAATCCATTTGAAAGCAGCAGTGCAATCATCCCATATCTAAGTCATCATGAGAAGAATCAT
TGTGATTCTGATGGCCTCATGCCAATGGCCTTGGATACTTTTGGCTGGAAGATCTTGTCAACAGCCAGTTCCCCGTTGCAGAAGGGTTTATCAACCTATA
ATGCTATAAGACTGCCTCATATAGAAGATTCAATTGGTCTAACACATGAGGAGATCATAAACAGCTTGTATGGTTCAAACCCAAGAGAAATTGCTCCTCA
ATCAGTTGAACATGGACTCAACTCTGACATTTGGTTCTCTTGCAACTCTGAAGTGTTCTCTGACAAAGCAGGGGGTAGATCTCTATTACTTGATAATTCA
AGTTGGATTACATCTGTTGAAGAAATTTCCCCTGATCATTCTGGTGAATGGACATGGAGCTGAAGATTCTCATAAATTTCTGTGGGTCCTATTATCATAT
GATGGAATGGCATGATTGCCTCTATCCCCACTAAAGGTATTTCTTTCTCCATGGTTATCCTTCATGTGGCCCCTGTTAGACCTATGTTAATGCCTTGAGA
TTTCAGGAACATGTTAGTTCCTTATAGTTCAAAAACCAAATATATTTTTTCCTTCTTTTTTCCCCCCCCTGAATTTCTATTCTCCTCTTATTA
>LE_HBa0041L02_SP6_43154 (trimmed for quality and cloning vector)
AATGATTCTCTGAACATGAAGAATATGCAGTTGCAAGAATGGACCAGTTTGATCTACCCTTGCTATGTAGCTCAGAGGAGCAAGATCTTCTGGAAGATCT
TAATCCTGAGAATCCATTTGAAAGCAGCAGTGCAATCATCCCATATCTAAGTCATCATGAGAAGAATCATTGTGATTCTGATGGCCTCATGCCAATGGCC
TTGGATACTTTTGGCTGGAAGATCTTGTCAACAGCCAGTTCCCCGTTGCAGAAGGGTTTATCAACCTATAATGCTATAAGACTGCCTCATATAGAAGATT
CAATTGGTCTAACACATGAGGAGATCATAAACAGCTTGTATGGTTCAAACCCAAGAGAAATTGCTCCTCAATCAGTTGAACATGGACTCAACTCTGACAT
TTGGTTCTCTTGCAACTCTGAAGTGTTCTCTGACAAAGCAGGGGGTAGATCTCTATTACTTGATAATTCAAGTTGGATTACATCTGTTGAAGAAATTTCC
CCTGATCATTCTGGTGAATGGACATGGAGCTGAAGATTCTCATAAATTTCTGTGGGTCCTATTATCATATGATGGAATGGCATGATT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.944567
Expected error %
0.163451
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0041L02
Clone
Clone name
hba-41l2
LE_HBa0041L02
P041L02
Clone type
BAC
Contamination
none
Estimated length
57,669
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found