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Clone Read LE_HBa0041K06_SP6_43114

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0041K06_SP6_43114
Primer
SP6
ID from Seq. Facility
LE_HBa_041_K06-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
668 trimmed for vector and quality, 828 raw
Genbank Accession
DU059393
Sequence
>LE_HBa0041K06_SP6_43114 (raw untrimmed)
AAAGGGATAATGTATTCGAATTACCCTNCAACAGAAATTAGTTAGTGTAAGAGAATTATGAATACTCTCAATAGAAATCAGGTAGTGTAAATCGCTCACT
GTTTCAACAAATATCTTCAACCCCATCACCTTCATCAACTAGTGCTCTATCTCTATGGTATTGACAAGATGAGAAGAGTAGGGCATCAAGATCTAAGTCT
CATGTGAGTAATTAAGGCAATAGGACCTAACAAACATGTACAAAGTATGGTAAGAACCACCCGAGCAAGTTTCTTGTGGTCAAGAAAAGATGCTTTGGGT
ATGGGCGGTCTGTTATAGGCTGAAAGATTTCACTTCTACCAGGCAAGGGAAAGGAGGTAACAACAATGGGGCTGAGACTCCAGCAGCGCCAACAGGTCTT
CCGACTCAGCAGGATGATTCATCTAGTACAAGTGCCGGTGGATTCTAGAACAATAGATTATATCTATGGGCCATTTTATCCTTTTGTGATCACTGGTACA
TTGCCTATGGGCCATTTTATCTCTTACATAGGGAAAAATAGATTATATCTAAAGGGTATATCTATAAATATCATTTGGGTTAAGTATTTAAACATTTAAA
CACCACTTCTTGAATAAGTTCCAGTAGTAAATGAGTTTCCTGAAATGTTCCCAGATTATGTTCCCGACTTTCCTCCCAAAAGGGAAATCAACTTCAAAAT
TGATCTCCTTCCACATACCCAAACTATTTCAATTCCTCCTTATAGAATGACTCCCGTTGAGCTTATGGAATTTTAAAAAAATGGTTAAAGACCTTTCTAT
ATAAAGGGCTAAAACCTGTTATCTTTTC
>LE_HBa0041K06_SP6_43114 (trimmed for quality and cloning vector)
AACAGAAATTAGTTAGTGTAAGAGAATTATGAATACTCTCAATAGAAATCAGGTAGTGTAAATCGCTCACTGTTTCAACAAATATCTTCAACCCCATCAC
CTTCATCAACTAGTGCTCTATCTCTATGGTATTGACAAGATGAGAAGAGTAGGGCATCAAGATCTAAGTCTCATGTGAGTAATTAAGGCAATAGGACCTA
ACAAACATGTACAAAGTATGGTAAGAACCACCCGAGCAAGTTTCTTGTGGTCAAGAAAAGATGCTTTGGGTATGGGCGGTCTGTTATAGGCTGAAAGATT
TCACTTCTACCAGGCAAGGGAAAGGAGGTAACAACAATGGGGCTGAGACTCCAGCAGCGCCAACAGGTCTTCCGACTCAGCAGGATGATTCATCTAGTAC
AAGTGCCGGTGGATTCTAGAACAATAGATTATATCTATGGGCCATTTTATCCTTTTGTGATCACTGGTACATTGCCTATGGGCCATTTTATCTCTTACAT
AGGGAAAAATAGATTATATCTAAAGGGTATATCTATAAATATCATTTGGGTTAAGTATTTAAACATTTAAACACCACTTCTTGAATAAGTTCCAGTAGTA
AATGAGTTTCCTGAAATGTTCCCAGATTATGTTCCCGACTTTCCTCCCAAAAGGGAAATCAACTTCAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.963053
Expected error %
0.148549
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0041K06
Clone
Clone name
hba-41k6
LE_HBa0041K06
P041K06
Clone type
BAC
Contamination
none
Estimated length
80,608
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found