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Clone Read LE_HBa0041B09_T7_42689

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0041B09_T7_42689
Primer
T7
ID from Seq. Facility
LE_HBa_041_B09-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
660 trimmed for vector and quality, 899 raw
Genbank Accession
DU059104
Sequence
>LE_HBa0041B09_T7_42689 (raw untrimmed)
TTTAACTTTTCTCCGGGGGGATCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTGCACGTATCTGTCTCCGCCTTAGGATCCCATGGTACTGTTTTGCAT
TAACATAGATTGGTCCATCCTCTGCCATATCAACGGGGAGTGGGACACGGGTAGGTGCTATGCCCATCATTTGAGGCTGCATTGACCAAATATCAAACTT
AGAACATTTACGAGATAATTAGGAGTCGGTATGTGATACCATTATACATCTCCTTTGCAAACTTACAGCAGCTACAACTAGAATGACAGAATTCTGCTCA
TTGTTTGCAATCAAGTATTCTCTCCGTCCCAAAGTAAGTGTCACTTTAGCAAACTACCCATTATTTTTCTTAACAGACATGAAATGAGCTAAAGTGACAC
TTATTTTAGGACGAATGGAGTACATACAAGAGACAAAAACCAAAGCAGATTACTCACATAAGGCTGAGGTCCATAAGCAGTATATAAGCCACTGATATAG
GGATCAGAGTAGCCAAAAGCAGATAAACCCTGCAACGTGAGAAAACAATAAATAAGATTACGCCAAAAGCTAAGGCAAAAATCTCTAAAAAGGAGACAAC
ATACAGTTGAATTGGCCACTTCATTTTGCAAAGAAAAAAGAGCAGGCTTTATTTGAACCTGCATATCTCTTCCATATCTTTCCATCATGAGCTGGAAAAT
CATAAGTAAGATGTAAGATGATCAATCATTATCAGCAAAAGAACTTCATCAAGTAAAAAAACTAAAGCTTGTTGAAATAGAAAATCTATTTATGTATCGG
GAAAAAAAAACTATCCTAATGGAAGAAAAAAAACTATAAAGTACTGTTACATTCTCTGAAGAAACCCATCGATCTTCAAAATTCTTTCCCCTGACCACT
>LE_HBa0041B09_T7_42689 (trimmed for quality and cloning vector)
CCTGCAGGCATGCAAGCTTTGCACGTATCTGTCTCCGCCTTAGGATCCCATGGTACTGTTTTGCATTAACATAGATTGGTCCATCCTCTGCCATATCAAC
GGGGAGTGGGACACGGGTAGGTGCTATGCCCATCATTTGAGGCTGCATTGACCAAATATCAAACTTAGAACATTTACGAGATAATTAGGAGTCGGTATGT
GATACCATTATACATCTCCTTTGCAAACTTACAGCAGCTACAACTAGAATGACAGAATTCTGCTCATTGTTTGCAATCAAGTATTCTCTCCGTCCCAAAG
TAAGTGTCACTTTAGCAAACTACCCATTATTTTTCTTAACAGACATGAAATGAGCTAAAGTGACACTTATTTTAGGACGAATGGAGTACATACAAGAGAC
AAAAACCAAAGCAGATTACTCACATAAGGCTGAGGTCCATAAGCAGTATATAAGCCACTGATATAGGGATCAGAGTAGCCAAAAGCAGATAAACCCTGCA
ACGTGAGAAAACAATAAATAAGATTACGCCAAAAGCTAAGGCAAAAATCTCTAAAAAGGAGACAACATACAGTTGAATTGGCCACTTCATTTTGCAAAGA
AAAAAGAGCAGGCTTTATTTGAACCTGCATATCTCTTCCATATCTTTCCATCATGAGCTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.970837
Expected error %
0.234134
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0041B09
Clone
Clone name
hba-41b9
LE_HBa0041B09
C12HBa0041B09
P041B09
Clone type
BAC
Contamination
none
Estimated length
133,708
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found