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Clone Read LE_HBa0009H07_SP6_4188

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0009H07_SP6_4188
Primer
SP6
ID from Seq. Facility
LE_HBa_009_H07-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
629 trimmed for vector and quality, 894 raw
Genbank Accession
DU024186
Sequence
>LE_HBa0009H07_SP6_4188 (raw untrimmed)
AATCCCACTTAATGATCTCCCCTTTTGAAGGATAAAAGTAATCGATCTAGCCGGTGTGTCATTGAACCTTACAGCTCAAGTGAAATGTCAATAGAACAGC
AAATAACAGCACAAAATTCAAGGTTTTGCTCAATTCCAAAACTTCTATTAAACCTAGTGTCTTCTGATGGGTCGTGGTCACTGTACCTTGTTTGGGATAG
GCAAGAAACATAAATGTGTCTTGAGTTACCGTTCATGTATATCCAACCTACCAAAAGAACAAATATTCATCTCCTACTGTACTTTTGCATCTTTTGCCTT
AAATAATGATGCTCTCACTTTCGATCTTCGGTATGGATTCTAAAGCAATTGTCAGAGTGCAACTACAAGATTAAGTATGAAGCCAGAAGTGTCACTGTGG
GACAAAGCCGCATAATATGAGTTGCCAAGACGCTTTACTTCTACGCAAGACATAAATAGCAAACTAAAAAAAGCAAAAGATCTGACCCAAGAAATTGATA
TTAGATAAATCTACCTTACATTAATCTGATAATGTGTTGCCAACATTAACTTAATTTGCCTAACTGTGAAGTAATGACTAACTTTAAGTACAATTAACTT
GATAGAATTATCTGAAGATGCTCCTGCTTCAAAACTAGAACCAACAAATAGACAAACCACAGAACAAACTTACAAAAAGAAACAAAACGAAGTCGAGGAA
TGTAGAAATAAGCTGAACTGAGAAGGACATGTCCCATGATTAATCTCAAATCCCATACTATGTACCTATACTTTTATACTAAACAACATGTATTCAGCAG
AAGCCTCCCGTGAGGTAGGGGTAAGGGCTACGTACCCTCTACCCACTCCAGACCCCCCCCCCCGGACTACACCGGGGTATGTTTTAAGTTTTTT
>LE_HBa0009H07_SP6_4188 (trimmed for quality and cloning vector)
GCCGGTGTGTCATTGAACCTTACAGCTCAAGTGAAATGTCAATAGAACAGCAAATAACAGCACAAAATTCAAGGTTTTGCTCAATTCCAAAACTTCTATT
AAACCTAGTGTCTTCTGATGGGTCGTGGTCACTGTACCTTGTTTGGGATAGGCAAGAAACATAAATGTGTCTTGAGTTACCGTTCATGTATATCCAACCT
ACCAAAAGAACAAATATTCATCTCCTACTGTACTTTTGCATCTTTTGCCTTAAATAATGATGCTCTCACTTTCGATCTTCGGTATGGATTCTAAAGCAAT
TGTCAGAGTGCAACTACAAGATTAAGTATGAAGCCAGAAGTGTCACTGTGGGACAAAGCCGCATAATATGAGTTGCCAAGACGCTTTACTTCTACGCAAG
ACATAAATAGCAAACTAAAAAAAGCAAAAGATCTGACCCAAGAAATTGATATTAGATAAATCTACCTTACATTAATCTGATAATGTGTTGCCAACATTAA
CTTAATTTGCCTAACTGTGAAGTAATGACTAACTTTAAGTACAATTAACTTGATAGAATTATCTGAAGATGCTCCTGCTTCAAAACTAGAACCAACAAAT
AGACAAACCACAGAACAAACTTACAAAAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.952976
Expected error %
0.0871429
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0009H07
Clone
Clone name
hba-9h7
LE_HBa0009H07
C02HBa0009H07
P009H07
Clone type
BAC
Contamination
none
Estimated length
108,787
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found