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Clone Read LE_HBa0118N04_SP6_40950

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0118N04_SP6_40950
Primer
SP6
ID from Seq. Facility
LE_HBa_118_N04-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
627 trimmed for vector and quality, 822 raw
Genbank Accession
DU060157
Sequence
>LE_HBa0118N04_SP6_40950 (raw untrimmed)
GGCAGCGTGAGATATACCGTCTCTCTCAGAGACCCGCACGACATAGGCAGCCATAGCTTATTATCGAAAAAATGATCAAACCTTTTCTTGATGTATCTCC
TTGACAAATATAGTCCCTACTGTTTATGAAAAGGTAACACCAGAAAATTTCCCATCAGGAACCTCCTATTCGTCTCATCTCATCCCTCTTACCTTCCCAA
AGACCATCTATAATGGAAACATCATCGAAAACTTTCAGATTTGAAATGTCACTTTAATTCAATAGGCCAGAAATACTCATCGAAAAGTATCTATTTTGAT
GCCTGTCTCAAAGGCCATTGTTGTTGTTGCTCTGTCCATCTCTTCTTGCAACCATAAACTGACTTCACTGTTGGCACGTGAGGCCATGGACAAAATATTC
AACCTTAACACTCTTTTTTCTAAAAAAAGTTCTGCTACATTTAGAGTTTTTGACCAAATACATGGAGATTGTGACGTCCCGTCACCTATCCAAGCGGATC
GCCACCTATCCAGGCAGATTGCAGCATGCGAAAGGGGACAGGCGGCCCAATAGTCCAGCGTACGAAGGGGCAGGCGGTCCAAGTGTGCAGCAGACAGAAA
GCAGGCAGCCTTGAGCCATGGAGGGGCTTGTTCAAGCCTTTCTAGAATCTTGGGGCAGACTAAGAGAAGTCTAGGAGTCCTTTTGGAAGAGTTAGAGACA
TTCTAGGAGTGTAGACCTGTCTTGAGTGCGGGTACTTAGGGACTTGCAAAGCAGCTTTTATTTACTCTTACTCATTAAAGTAGTATAAGATGGAGGGTCA
TTGGATTTGTAAAACATCCACC
>LE_HBa0118N04_SP6_40950 (trimmed for quality and cloning vector)
ACCCGCACGACATAGGCAGCCATAGCTTATTATCGAAAAAATGATCAAACCTTTTCTTGATGTATCTCCTTGACAAATATAGTCCCTACTGTTTATGAAA
AGGTAACACCAGAAAATTTCCCATCAGGAACCTCCTATTCGTCTCATCTCATCCCTCTTACCTTCCCAAAGACCATCTATAATGGAAACATCATCGAAAA
CTTTCAGATTTGAAATGTCACTTTAATTCAATAGGCCAGAAATACTCATCGAAAAGTATCTATTTTGATGCCTGTCTCAAAGGCCATTGTTGTTGTTGCT
CTGTCCATCTCTTCTTGCAACCATAAACTGACTTCACTGTTGGCACGTGAGGCCATGGACAAAATATTCAACCTTAACACTCTTTTTTCTAAAAAAAGTT
CTGCTACATTTAGAGTTTTTGACCAAATACATGGAGATTGTGACGTCCCGTCACCTATCCAAGCGGATCGCCACCTATCCAGGCAGATTGCAGCATGCGA
AAGGGGACAGGCGGCCCAATAGTCCAGCGTACGAAGGGGCAGGCGGTCCAAGTGTGCAGCAGACAGAAAGCAGGCAGCCTTGAGCCATGGAGGGGCTTGT
TCAAGCCTTTCTAGAATCTTGGGGCAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.975131
Expected error %
0.866269
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0118N04
Clone
Clone name
hba-118n4
LE_HBa0118N04
C03HBa0118N04
P118N04
Clone type
BAC
Contamination
none
Estimated length
102,892
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found