Notice: Load is currently high due to bots. Some functionality has been turned off.

Clone Read LE_HBa0246C08_SP6_405125

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0246C08_SP6_405125
Primer
SP6
ID from Seq. Facility
LE_HBa_246_C08-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
559 trimmed for vector and quality, 981 raw
Sequence
>LE_HBa0246C08_SP6_405125 (raw untrimmed)
NNCACTTACCACGATGTGAGGGACCACTCTCAAGGCCCTATTATGTCTCCATTAGGTGTATCATGTTCGATCTATGTCCTTGAGTTGATAGGAAGCTAGC
TTTGCCTTCCCATTTGAACTTGCCCCCATAGCATAGAGAATCTTATAGAAATCATGTAGGAAGTCTTGGGAGTCTTTGTTAACCTTTGACCCATAATACA
TTGGAAGGTTCATCCTCGGAAGTCCCTTAAGTGGGTAACATGATACTATCATTTGGTTGAACATGAGGTCTATCCTCTCGATTAGGTTGAGACGTCATGT
ATTGAGTCGTCATGGCTTGAACTTGAGTGGTTACCGCTTGAGCTTGGGTATTCATGGCTTGAGACAAAGTCAAAAATTTTGACCTTATCTCTCCATCTGT
CATAGGTGGAGGAATGACCGGAGCTTGGTCTTATGGAGGCACTTGATTGCCTTGTGGAGCGGCTTGGTTCTCTCAGGGAGGAACTCCCGCATTAGCCAAA
TCTTTCTCTACTCTCCTTGCGGCTTCCCGTCGTGTAGTCATCTCCAATATCAATAAGAAAATGATTAGAAGAGAAAGGGACACATAGAATTACCATTCAT
AAGAAACAACTTTCAACATTACCAAGAAGTTAGAATTCTTAATCATCACATAACCTCTCATTCATAAGTCTGACACGCTTCACACCTTTGAACAAGACTC
TACATAGATGGTTTTTAGTGAGAACATTTAACCTAAGATTTCTTTCAACCTCCTGCTCTGTAACCAAGGTTTTTACGACCGGGGAACAACCCCTAAAGGT
AACCGGGTTATCTTTCTCGGGAAAGGATAGGAATTGATCAAAACGTTTTTTCTGACGATTTATTAGTTAAAAACCGCGAAAATTAAAAAAATTTTTAATA
ATGGGGGGTCAACAAACCTCTCACAAATAAAAAAGGGAGGATATTTTTCTCCTCATTCTCCAATACATTATATGGTTTATT
>LE_HBa0246C08_SP6_405125 (trimmed for quality and cloning vector)
CCACTCTCAAGGCCCTATTATGTCTCCATTAGGTGTATCATGTTCGATCTATGTCCTTGAGTTGATAGGAAGCTAGCTTTGCCTTCCCATTTGAACTTGC
CCCCATAGCATAGAGAATCTTATAGAAATCATGTAGGAAGTCTTGGGAGTCTTTGTTAACCTTTGACCCATAATACATTGGAAGGTTCATCCTCGGAAGT
CCCTTAAGTGGGTAACATGATACTATCATTTGGTTGAACATGAGGTCTATCCTCTCGATTAGGTTGAGACGTCATGTATTGAGTCGTCATGGCTTGAACT
TGAGTGGTTACCGCTTGAGCTTGGGTATTCATGGCTTGAGACAAAGTCAAAAATTTTGACCTTATCTCTCCATCTGTCATAGGTGGAGGAATGACCGGAG
CTTGGTCTTATGGAGGCACTTGATTGCCTTGTGGAGCGGCTTGGTTCTCTCAGGGAGGAACTCCCGCATTAGCCAAATCTTTCTCTACTCTCCTTGCGGC
TTCCCGTCGTGTAGTCATCTCCAATATCAATAAGAAAATGATTAGAAGAGAAAGGGACA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.973033
Expected error %
0.204437
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0246C08
Clone
Clone name
hba-246c8
LE_HBa0246C08
P246C08
Clone type
BAC
Contamination
none
Estimated length
80,678
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found