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Clone Read LE_HBa0242J02_SP6_404253

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0242J02_SP6_404253
Primer
SP6
ID from Seq. Facility
LE_HBa_242_J02-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
596 trimmed for vector and quality, 775 raw
Sequence
>LE_HBa0242J02_SP6_404253 (raw untrimmed)
CCTCTTTTAAGTGTTGTTATTGTAGTAATGTGACTGGAAACCTCCATAAAGTGGATATTTGCTAAAATAAGAGTTAAATATAAACGCTTGCTTGTATATG
CATGCTAAGTTTGAGAAACAATTTGAATGCTGATTGGATGAAAAAAAAGGTTGTACTGTGATGAACTGCTACGGCAGGAGTCTAATCCAGAAACACCTAC
TGTGATTAAATTGGTGTTATATATTCTTCCATAGCTTCCCGTGTTCTCACAGATGCTCCGAAGATAGCATTTTGAATGGTCCATTCACTCGACTTACCAT
GTGTTCCCTTATCAACTAACAAAAACATCAGATGTTGTGACTTAATGAAGTTTGACTTTTCTCCTGATTGGTTTTTCTTCGCTAAGTTAGTGTAAAAAGA
ATCGAGGATCAGCTGCTGCAAAAAAGTTGCCATCATGTCCAGCATCTTTAACGTCTCTTCACAAATACCGATCACTCAAAGAAGTAAATAAGATCCCTCT
CTGCAAAGTGACGAAGGGGTGATTTGCATATAGCTAAAGCTTGAAGAGATAGCGTTAGTAATATAAAGAAAATAACAGTAGTAATATAAAGAAAAAAGAA
GCTGGTAAAATATACGGAACTCTTAAACAAGGACATAACATTATAGCAAGAGCCTGTAGAACAGGTCCTGTTTCACCTTAGGGTGATAAGACTCATTATT
AGTTCCTTATTAAGTACACAAGCCGGTAGTTTTTCTTATTTACTAAATTCCATTCAGATTCAAGAATTTTTGAAG
>LE_HBa0242J02_SP6_404253 (trimmed for quality and cloning vector)
TTGTTATTGTAGTAATGTGACTGGAAACCTCCATAAAGTGGATATTTGCTAAAATAAGAGTTAAATATAAACGCTTGCTTGTATATGCATGCTAAGTTTG
AGAAACAATTTGAATGCTGATTGGATGAAAAAAAAGGTTGTACTGTGATGAACTGCTACGGCAGGAGTCTAATCCAGAAACACCTACTGTGATTAAATTG
GTGTTATATATTCTTCCATAGCTTCCCGTGTTCTCACAGATGCTCCGAAGATAGCATTTTGAATGGTCCATTCACTCGACTTACCATGTGTTCCCTTATC
AACTAACAAAAACATCAGATGTTGTGACTTAATGAAGTTTGACTTTTCTCCTGATTGGTTTTTCTTCGCTAAGTTAGTGTAAAAAGAATCGAGGATCAGC
TGCTGCAAAAAAGTTGCCATCATGTCCAGCATCTTTAACGTCTCTTCACAAATACCGATCACTCAAAGAAGTAAATAAGATCCCTCTCTGCAAAGTGACG
AAGGGGTGATTTGCATATAGCTAAAGCTTGAAGAGATAGCGTTAGTAATATAAAGAAAATAACAGTAGTAATATAAAGAAAAAAGAAGCTGGTAAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.952746
Expected error %
0.418153
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0242J02
Clone
Clone name
hba-242j2
LE_HBa0242J02
P242J02
Clone type
BAC
Contamination
none
Estimated length
87,322
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found