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Clone Read LE_HBa0118A18_T7_40355

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0118A18_T7_40355
Primer
T7
ID from Seq. Facility
LE_HBa_118_A18-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 852 raw
Sequence
>LE_HBa0118A18_T7_40355 (raw untrimmed)
TCGCTGAAGAGCGGTTCGCGAGAGCTCATTAGGCGGGGGCCCCTCTCCCACGGCGGACATGAGTAGAAGGAGGGTCGGATGACTCTTATGCACAGTTGGC
AACACTCACATTTACTGCAGGGGGTTGAGGAGGTATCTTCTGACGCTTGGACGCACACACATTCGTCTGACGATGCTTCATAGAGATAGCTACTT
ATTTA
CAGCGCGGACGTAGACGAACGTGGCTACCGATGTGACTGTCTCTCGTATATACTCTCAAGATATTCCTAGCTCCCCCCCTCCTACTAATCATATTGTTCT
GTTTTGGGATCGAAGCTCTGTAGTGGAGGAGCATACGTACCTTACCTCTTCCATATTCTACAATATTCTTGGTTTCATCCTACATCAACTAAAATAAGCC
CGTAGGATTCACTCCCACTATGGATTGCGTCTTATGGTGTTTGCATCCCATTCTATCATACACCTAGGTTGTAGCACATCAACTCCTTCGATATGATAAT
AATGATCTAACCCTCTTAGTCGGTCTTCTTACTGTTCGCATTCTCTATCCTTTTTACCATTTCGTTGCTCTATGACACGACTTGCGTAAACGAAATGTCT
ATTCTATGTTTTATATGCGTTCCGAAGTGTTCTCTTCATCTCCTAACGGGATGATGCAATCTGTCCAGTACGTCAAGTGGTGTTACTCTCCTTACANCAT
TCTTCTTTCGCTCTCACCTGGTTGTGTCATTGTCGTCTTCACATCACCCTTACACTTTGTTATCTAAGATACACATAAAGCATGTTGAGAGAAACAAGGA
CTGGAGACATAAAATTGGATACTCATGTTTGGATTGTTAACGCTGCACATCC
>LE_HBa0118A18_T7_40355 (trimmed for quality and cloning vector)
AT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.31311
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0118A18
Clone
Clone name
hba-118a18
LE_HBa0118A18
P118A18
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found