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Clone Read LE_HBa0227E20_SP6_403463

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0227E20_SP6_403463
Primer
SP6
ID from Seq. Facility
LE_HBa_227_E20-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
624 trimmed for vector and quality, 991 raw
Sequence
>LE_HBa0227E20_SP6_403463 (raw untrimmed)
NNAAGATGTCACTCTAAGTTATGTTTTTCTCTCACTAATGTGAATTTCCTACTTTTAACTATTAACAAATGTTTATCGAAATACAATTCATGTATCAAAT
GTTCATTTTTACTACGATGATATTTCAAGTAGGAAAAGGATACAACTGTAGTAGAAATAAGCAACTTTTATAAATCTTGGCCAAACATATTCTATTCTTA
ACGTTATTTTCATCTATTTAGTTCAAATTAAACATATAAGACATGTAAAAACTTATTTTCAGCTTTCCTTCCCCCATTAAAAGTGTTCAGATTTTAAATA
AACTGTAATATCAGAATAATAGATTCTAAAATGCATAATCCTTTGTTAAGGGAAAAATTCCCACATCGGTTGGGCTCGTTATAAGGCGTGACCAATCCTC
CTCCCTATGAGTTAGCTTTTGGGGCGTGAGTTAGGCCCAAACCTAATTTTAACAAAGATCACTTTAGAAAAGTGACTTCTTGTTTTCTTGTAGAGTGCCT
AGATTTGTAATTTTTAAAAGGTTAATGAATTTGCTAGCATATTGTTGAATGTTAGGTTATAAACCATGGGGTGACACCTTTGCTCTTGGAGGACTTCAAG
AGAGAGGTTATTGAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAGCTATGGAAACAGGAAGACAGCTTGGAAGGTTTCGGGCATGCATTCGTTGTGT
CTGAAGATCAAAAACTTGATTGGAGTGACAGGTTTGGAATACGGACTCTTTCCTCCTCATATTCCGCAAAGTGGATTTGTTTTCAGAAGTTGCCCCTCAA
AGCTTCAGGGGCCTTGTCTCCCTTACATAAATAAATAACTCAATTTGAAGGGTTTCTTTACTTTAAAACATCCCTTGGTATAAAGGGAAAAACACCAATT
CCCTTTTGGGGTTTTTTTTATAAAATTAGGGTAACCCAGAATTGGTTAACCAAAACCTTTTTTGGGTTAAAAAACTTGTATTTTTTCTCAA
>LE_HBa0227E20_SP6_403463 (trimmed for quality and cloning vector)
TGTTTTTCTCTCACTAATGTGAATTTCCTACTTTTAACTATTAACAAATGTTTATCGAAATACAATTCATGTATCAAATGTTCATTTTTACTACGATGAT
ATTTCAAGTAGGAAAAGGATACAACTGTAGTAGAAATAAGCAACTTTTATAAATCTTGGCCAAACATATTCTATTCTTAACGTTATTTTCATCTATTTAG
TTCAAATTAAACATATAAGACATGTAAAAACTTATTTTCAGCTTTCCTTCCCCCATTAAAAGTGTTCAGATTTTAAATAAACTGTAATATCAGAATAATA
GATTCTAAAATGCATAATCCTTTGTTAAGGGAAAAATTCCCACATCGGTTGGGCTCGTTATAAGGCGTGACCAATCCTCCTCCCTATGAGTTAGCTTTTG
GGGCGTGAGTTAGGCCCAAACCTAATTTTAACAAAGATCACTTTAGAAAAGTGACTTCTTGTTTTCTTGTAGAGTGCCTAGATTTGTAATTTTTAAAAGG
TTAATGAATTTGCTAGCATATTGTTGAATGTTAGGTTATAAACCATGGGGTGACACCTTTGCTCTTGGAGGACTTCAAGAGAGAGGTTATTGAATTGTTC
AAACTTCCAATGGAAGAAAAGAAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.933862
Expected error %
0.0821405
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0227E20
Clone
Clone name
hba-227e20
LE_HBa0227E20
C02HBa0227E20
P227E20
Clone type
BAC
Contamination
none
Estimated length
82,174
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found