Clone Read LE_HBa0227C19_SP6_403273

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0227C19_SP6_403273
Primer
SP6
ID from Seq. Facility
LE_HBa_227_C19-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
660 trimmed for vector and quality, 1017 raw
Sequence
>LE_HBa0227C19_SP6_403273 (raw untrimmed)
NNAAACGGATCTAATGGATCTAGAATAAATATACTCATGTGTTAAATTTGAGATAGCCTATAAACCATAGAGTTATAATCTATACAGAATTTAAGAGCTC
ATAATAATCTATATAGGAATTCATTAATAATTAGCCATGATCAATCTACCTATATTTTTGTCAAATTGATAGATTTGAGGAGGTAAAGGGTTAATGGAGA
ATTTCATTGGAAAACATCAATTATACATCAATAATATCATATCTTACGTTTGAAAACATTTCATTCAAGAACCCAAGACATAGAGTAGAAATTGGACTTT
TTTGTCCTTTTGAAATTTTTGAAAATTGTCTTTGGAATTGACTCTAAGGTGATATAAACCATTATATGAAGAACTCCAATGACTTATTAGAAGAACCCAA
TGATAATTCAATAAGAAACTCCATTGAATATAAATCTTCAAGCTCCATCTTCACCTTGAGATCTCATTGAGGTTTTTGGAGAAACATTTGGTTGGAATAG
GTCTTGATCTAGGTGCAAGGGTTTAAATGAGATCTTAATGACTTATATAATCGTAAAATATCCATAAATACCTCAATATAACCGTTATCCTATTTTATAA
TACTTGTGGTGAATGTTCCCAAAAAAAACCCAAGTCTTAATAGATAATTGGGAGAATTGCAGCACCATCGATGCCATAGCATCAATGATCCGTTTGGTGA
GACCATACCTCATTTTATAGGGGTCCGTTAATTAAGTTTTGTGACTCCCAAAACTTGAAGTATACATGGATTCCATCCAATGCCATCAAAAAAAAGGTCC
GTTATGGTTATTTGATGGGCTATTTGTCCTGGGGGCAGCCCAATTTCCAAAGGCTTGGGCCAAGGTTTGAGTTTCTTAAAATGGGGGTCCCTTCCTTCCT
AGGGACCCCTTTGTGGGGTCTCTAGGGTGGAAGTTTCTAACCTTAAAAGGTTTAAACCTCTCTAACAACCTCACCTGTTCTTAGGGTCACTAATAAACCT
ATTCTCTCAACAATTTG
>LE_HBa0227C19_SP6_403273 (trimmed for quality and cloning vector)
ATATACTCATGTGTTAAATTTGAGATAGCCTATAAACCATAGAGTTATAATCTATACAGAATTTAAGAGCTCATAATAATCTATATAGGAATTCATTAAT
AATTAGCCATGATCAATCTACCTATATTTTTGTCAAATTGATAGATTTGAGGAGGTAAAGGGTTAATGGAGAATTTCATTGGAAAACATCAATTATACAT
CAATAATATCATATCTTACGTTTGAAAACATTTCATTCAAGAACCCAAGACATAGAGTAGAAATTGGACTTTTTTGTCCTTTTGAAATTTTTGAAAATTG
TCTTTGGAATTGACTCTAAGGTGATATAAACCATTATATGAAGAACTCCAATGACTTATTAGAAGAACCCAATGATAATTCAATAAGAAACTCCATTGAA
TATAAATCTTCAAGCTCCATCTTCACCTTGAGATCTCATTGAGGTTTTTGGAGAAACATTTGGTTGGAATAGGTCTTGATCTAGGTGCAAGGGTTTAAAT
GAGATCTTAATGACTTATATAATCGTAAAATATCCATAAATACCTCAATATAACCGTTATCCTATTTTATAATACTTGTGGTGAATGTTCCCAAAAAAAA
CCCAAGTCTTAATAGATAATTGGGAGAATTGCAGCACCATCGATGCCATAGCATCAATGA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.923575
Expected error %
0.29038
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0227C19
Clone
Clone name
hba-227c19
LE_HBa0227C19
P227C19
Clone type
BAC
Contamination
none
Estimated length
132,095
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found