Clone Read LE_HBa0225N16_SP6_402780

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0225N16_SP6_402780
Primer
SP6
ID from Seq. Facility
LE_HBa_225_N16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
708 trimmed for vector and quality, 864 raw
Sequence
>LE_HBa0225N16_SP6_402780 (raw untrimmed)
TTCGAAGAAGACTGATGGAGGTGAAGCTGATGCAGATCAACAACTGAAAAATGACTGTGATGATCAGAATCATAGTCTACCTGAAGAGGCTGTTGAGGTT
GAAAAGGATGACATGGTATCTGGTACTACTCTAAATTCCAGCCAGAATACATCAGACTCCCCAGAAAATGATGTCACTGTTTATGATGAAGAACATGTTG
ATCAGCTCAATAAGTCTGCTCCAAGATCAGGATGGAAGAATAGTTCATCACATCCTCTTGATAATCTCATTTAGCCTTTGAATTCTGGAATTCATACTAG
ATCAAAAACAAGAAATCTAGTTGCATTCTCAGCATTCATATCATCCATTGAGCCGAAGAATGTGAAAGAAGCATTAGGTGATGCAGACTGGATCAATTCT
ATGCAAGAAGAACTTCATCAGTTTGAAAGAAGCAAGGTATGGTACTTGGTTCCTCGACCTGAAGGCAGAACAGTAATAGGAAATATATGGGTTTTCAGAA
ACAAGCTTGATGAAATGGAGTGATTACTAGAAATAAATCCAGGTTGGTGGTGCAAGGATACAATCGAGAAGAGGGAATAGACTATGATGAGACTTTTGCA
CCTGTTGCTAGAATGGAAGCTATTAGAATTTTAATAGCTTTTCTGCATTTATGGGGTTCAAGCTGTATCAAATGGATGTGAAGAGTGCATTTCTGAATGG
AGATCTCAAAGAGGAGGTGTTTGTCAAGAAACCTCCTAGTTTTGAGGATGTAGAGCTACCAGATCATGTGTTTAGATTGAATAAGGCACTGTATGGTCTG
AAAGCGGCTCCTTGAGCATGGTATAAACGCTGTCAAAGTTTCTGCCGAACAAGATTTCAAAAAG
>LE_HBa0225N16_SP6_402780 (trimmed for quality and cloning vector)
GGAGGTGAAGCTGATGCAGATCAACAACTGAAAAATGACTGTGATGATCAGAATCATAGTCTACCTGAAGAGGCTGTTGAGGTTGAAAAGGATGACATGG
TATCTGGTACTACTCTAAATTCCAGCCAGAATACATCAGACTCCCCAGAAAATGATGTCACTGTTTATGATGAAGAACATGTTGATCAGCTCAATAAGTC
TGCTCCAAGATCAGGATGGAAGAATAGTTCATCACATCCTCTTGATAATCTCATTTAGCCTTTGAATTCTGGAATTCATACTAGATCAAAAACAAGAAAT
CTAGTTGCATTCTCAGCATTCATATCATCCATTGAGCCGAAGAATGTGAAAGAAGCATTAGGTGATGCAGACTGGATCAATTCTATGCAAGAAGAACTTC
ATCAGTTTGAAAGAAGCAAGGTATGGTACTTGGTTCCTCGACCTGAAGGCAGAACAGTAATAGGAAATATATGGGTTTTCAGAAACAAGCTTGATGAAAT
GGAGTGATTACTAGAAATAAATCCAGGTTGGTGGTGCAAGGATACAATCGAGAAGAGGGAATAGACTATGATGAGACTTTTGCACCTGTTGCTAGAATGG
AAGCTATTAGAATTTTAATAGCTTTTCTGCATTTATGGGGTTCAAGCTGTATCAAATGGATGTGAAGAGTGCATTTCTGAATGGAGATCTCAAAGAGGAG
GTGTTTGT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.95073
Expected error %
0.31502
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0225N16
Clone
Clone name
hba-225n16
LE_HBa0225N16
P225N16
Clone type
BAC
Contamination
none
Estimated length
100,253
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found