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Clone Read LE_HBa0223P20_SP6_401455

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0223P20_SP6_401455
Primer
SP6
ID from Seq. Facility
LE_HBa_223_P20-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
655 trimmed for vector and quality, 934 raw
Sequence
>LE_HBa0223P20_SP6_401455 (raw untrimmed)
ATAGTGATCAGGCTAAGGGTTTGCTTGGGGATTAGAATCATAGTTCTCTGGTGCCTACCACGTTCATGGTGTAAATTTGAGGCGTGAAAGATAGAGAGGT
TGTATCCGAAAAACTCTCGACGTAAGTACATCAAACTCAAGAAAACAAAAAAAATCAATGAAAAGGGCATAACAATACATACATAACATGATAATTGGTA
AAAAAAAAACATAATTTGAATATATTTGTGTGTTAGAATTTTTAATGATTGCGAAAATATAAACATGTAAGCATTCAGAAATCTTATCAATTAATTATAT
GATTTTCACATATATTAAATACTATGATAATTTCAGTCAAGAAAATGTACCTGAATAAACCATTATAATTTCTTGACTTGAATGAGTGGAAGTCTTTTAT
TTTCGATTCTTCATAAGTTATTTCTCTCTCTTGCCTAATACTTAATAAATAGATTTGATGGATAAGAGTCATTCCCACGTTTCCATCATGGTGAGTAGTG
GAGATAATGGATAGTTGGAAGAGGTAATGGGTAAAGTGGAAGACTTAATGGGTAGTTGAAGTAACTTCTCCACTTTCCCACTTCTCCACTTTCTCACTTA
TCCAATAAGAATTAGAATTTAGTTAGTAATTAAATATTAAACAAAAATGATACTAATGTGAGTGGGTCATAAAACTAAAATTCTCCCACTTAACACAGGT
AACATCCATTTACTTATTTGTTTAATAAACATTTTCTTACAATGTGCACATATACTCAATTCAATATAATTTATTGGTATTAATAAAAGCAACTATATGA
ATTTTTGGTGGTTGTCCCCCACTTTATTTGGCATAATCCTTTCCATGGACCACAAATTTAACTCTATGCCCTAATAAAAAATTTCAAAATACAAAAGGGG
GCCCACAAAAATCCTTAAAAAATATTTTTATCTA
>LE_HBa0223P20_SP6_401455 (trimmed for quality and cloning vector)
GTGATCAGGCTAAGGGTTTGCTTGGGGATTAGAATCATAGTTCTCTGGTGCCTACCACGTTCATGGTGTAAATTTGAGGCGTGAAAGATAGAGAGGTTGT
ATCCGAAAAACTCTCGACGTAAGTACATCAAACTCAAGAAAACAAAAAAAATCAATGAAAAGGGCATAACAATACATACATAACATGATAATTGGTAAAA
AAAAAACATAATTTGAATATATTTGTGTGTTAGAATTTTTAATGATTGCGAAAATATAAACATGTAAGCATTCAGAAATCTTATCAATTAATTATATGAT
TTTCACATATATTAAATACTATGATAATTTCAGTCAAGAAAATGTACCTGAATAAACCATTATAATTTCTTGACTTGAATGAGTGGAAGTCTTTTATTTT
CGATTCTTCATAAGTTATTTCTCTCTCTTGCCTAATACTTAATAAATAGATTTGATGGATAAGAGTCATTCCCACGTTTCCATCATGGTGAGTAGTGGAG
ATAATGGATAGTTGGAAGAGGTAATGGGTAAAGTGGAAGACTTAATGGGTAGTTGAAGTAACTTCTCCACTTTCCCACTTCTCCACTTTCTCACTTATCC
AATAAGAATTAGAATTTAGTTAGTAATTAAATATTAAACAAAAATGATACTAATG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.933417
Expected error %
0.31121
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0223P20
Clone
Clone name
hba-223p20
LE_HBa0223P20
P223P20
Clone type
BAC
Contamination
none
Estimated length
115,124
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found