Clone Read LE_HBa0223D21_SP6_400313

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0223D21_SP6_400313
Primer
SP6
ID from Seq. Facility
LE_HBa_223_D21-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
448 trimmed for vector and quality, 988 raw
Sequence
>LE_HBa0223D21_SP6_400313 (raw untrimmed)
GATGGTTTCAACTACCGAACAGCTACAGATTCTCTAGCTACAAAATACTATCCTTTGAGGGCGTACTCTTTTTTTAACTTGTAATTCTGTTCCTTATGGG
AGATTTCTCTTCCATTCTCTTTTCTATCTCTTTTCCCACAATTCTACTATAAGGATGAATTTGAATTCGAAATTCAAATGCTTCTCAGAAAGGATCACAT
TGAAAGCTGTCAACAGTACCAATTTGTACCATTTTCAACGAATTCAAAAGAGGGTCGTTCAATTTTCAGCAAGGACAATGACGCTACAACATTTCGACAC
CTTACGAATCTCAAACTACTCTTGTATGAGAGGATAAGGAGAGAGAGAGAAGAGGACACAACTTTTTTTTTGGAAATTAGCGGATTGATACGATGGGTCG
CACGCTGTTCTTCGCGAGGAAGACGACGTATATGGATCACATTTGTACTGCTGTATGCAGTTGTTTACCGATGTTGTTGTGTGTATTGTACGATGAGTCC
TTCTAAAGAGAAGATTGGGCTGGGGTTTCAGTATTTTTGAATGTATAACTTACATTAATACCATAGTGTAAAATCTAAATTACCTTCTATGTCTATTATT
TTTATAATTACCTAAATCTCATAATTTTTTTAGACATTTCAAATAAATAATTAAGGATCCCGGATATATTATTTGCCGATTCATTATGTTATCAATTATT
TGCCCTTTATTAAGGAAAAAAAAAATTTTTAAAAATCAAATTTAAAATCTTCATTAGTATCCATTTTGTTCCCCCTTAATTAAGGGGTAAAAACTGTAAA
AATTTAAATTTAAAAAATTCCCCATAATTTTCCTTTTTTCCCCTTTAAAAAAATTATTTTTCTCAAGAATTTCTCCAATTTCATTTAATTGGTTTATCAC
CCCTTATAAAATCTCCCAAAAAATTTAAACTTTTTTTTTCCCTTAATTGTGCTCCACCATATCCTCCCCTCATGTTTCTAATAAAAAA
>LE_HBa0223D21_SP6_400313 (trimmed for quality and cloning vector)
GATTCTCTAGCTACAAAATACTATCCTTTGAGGGCGTACTCTTTTTTTAACTTGTAATTCTGTTCCTTATGGGAGATTTCTCTTCCATTCTCTTTTCTAT
CTCTTTTCCCACAATTCTACTATAAGGATGAATTTGAATTCGAAATTCAAATGCTTCTCAGAAAGGATCACATTGAAAGCTGTCAACAGTACCAATTTGT
ACCATTTTCAACGAATTCAAAAGAGGGTCGTTCAATTTTCAGCAAGGACAATGACGCTACAACATTTCGACACCTTACGAATCTCAAACTACTCTTGTAT
GAGAGGATAAGGAGAGAGAGAGAAGAGGACACAACTTTTTTTTTGGAAATTAGCGGATTGATACGATGGGTCGCACGCTGTTCTTCGCGAGGAAGACGAC
GTATATGGATCACATTTGTACTGCTGTATGCAGTTGTTTACCGATGTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.956449
Expected error %
0.681596
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0223D21
Clone
Clone name
hba-223d21
LE_HBa0223D21
P223D21
Clone type
BAC
Contamination
none
Estimated length
125,751
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found