Clone Read LE_HBa0223D02_SP6_400234

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0223D02_SP6_400234
Primer
SP6
ID from Seq. Facility
LE_HBa_223_D02-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
541 trimmed for vector and quality, 892 raw
Sequence
>LE_HBa0223D02_SP6_400234 (raw untrimmed)
GCCTTTATAAGACTCTTAGCACATACGGAAATCAATATTCTCTTACTAAGCATGGTTTGGTCAGCTTCATTCCATATACCTCGAAATATATATGAAAGCA
GCCGTTGCTTTATACCGCTCAGGAAAGAAGTTTCTGATTGAGGCAGACTATGATGAAAACCATTTCCAACATGATTTACAAGCACCTGATGAAATAGGCT
ACTGTAAGAGATTATTATGCACAACACCCTTGTCAAATTTCAGATAAGAGAGATACAAAGTTTCCGCCCTCCTGCTCACCTACCCCAACCCGAGATAAAA
TAAAATATGAAGAAAGAAATGGCCAGAATCAAATATACATCCTTCAGAATTCTTTCCACATGGTGAGTAATGTTTGGATTTAGGTTGCCTAAAAAGGAAC
GCTCAAAAGCTTTAAAGAACAACAAACAAGATCTTTCAGACCACTTTGATGTAATCACGAGATAGATATCTTTTTTTTTATAAGTAATGACAAGACAGAT
ATATTGGTGGGAATCACTGTGGAGAGACAATGGAAGTTCAATTTCTAGGATATACCAAAGCTGTGAACATTTAAACAAAAAAGAGGGAAAGAAAACACGA
TGGCCTTTTGGTTAGTCCTTCGGTGAGCTATAACTTTAGGGGAGTTCCTTCCATTTCTCTTAAAACGGGCTCCCTATAGGTGTTCCACTCTTTTATATCA
GGAAAGTAATATGAAAAGGAACTTTTCTCTAATTCACTTTAATTTTCCCCCTGAATAAATCCTGGAACTTTTAATCAAAAAAATGAATGTTCTGGAAACC
AATATTAAAACTTTCATCCCCCAAAGGGTGGATGGTTTTTTTTTTGGGTTTTGGAAACTAAAAATGGTTATACCGGTTAATGGAATGAACAA
>LE_HBa0223D02_SP6_400234 (trimmed for quality and cloning vector)
ACGGAAATCAATATTCTCTTACTAAGCATGGTTTGGTCAGCTTCATTCCATATACCTCGAAATATATATGAAAGCAGCCGTTGCTTTATACCGCTCAGGA
AAGAAGTTTCTGATTGAGGCAGACTATGATGAAAACCATTTCCAACATGATTTACAAGCACCTGATGAAATAGGCTACTGTAAGAGATTATTATGCACAA
CACCCTTGTCAAATTTCAGATAAGAGAGATACAAAGTTTCCGCCCTCCTGCTCACCTACCCCAACCCGAGATAAAATAAAATATGAAGAAAGAAATGGCC
AGAATCAAATATACATCCTTCAGAATTCTTTCCACATGGTGAGTAATGTTTGGATTTAGGTTGCCTAAAAAGGAACGCTCAAAAGCTTTAAAGAACAACA
AACAAGATCTTTCAGACCACTTTGATGTAATCACGAGATAGATATCTTTTTTTTTATAAGTAATGACAAGACAGATATATTGGTGGGAATCACTGTGGAG
AGACAATGGAAGTTCAATTTCTAGGATATACCAAAGCTGTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.954478
Expected error %
0.755035
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0223D02
Clone
Clone name
hba-223d2
LE_HBa0223D02
P223D02
Clone type
BAC
Contamination
none
Estimated length
99,753
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found