Clone Read LE_HBa0238N19_SP6_399343

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0238N19_SP6_399343
Primer
SP6
ID from Seq. Facility
LE_HBa_238_N19-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
629 trimmed for vector and quality, 852 raw
Sequence
>LE_HBa0238N19_SP6_399343 (raw untrimmed)
NNTTCGTAGTTTCGATAAATGAAGGAAGGTTACCATATTGGAATGATATTAGGTGGAGTTTATTAACATTTTAAGACATTATCAAAGCAACTAAAATGAT
GGAAATAACCCTAAAGTAAATAGGTTTGTTATATATTTTTGTTTAAATTAGCTTAAGTAAGTGGATTTTAGAATTTAGTTTGGTCAATATTTTGCTTTCA
TATTGGAGCCATTATTTCTAATGATATAAGTACTATGAATTTGGCAAAATGTGAAAATAAAGATGTGTGGTCTCAATCTATAAAAATAAACTATAGACAA
AATTGTTCCACAAATTGAAAAGTCTAAAGCTAGCACAAACAAAAGTGCACAAGTACCACCTCAAATCTATGTTTGAAATCTCAAAGACATATTTATACTA
TGCTAAGGTCCTATTATCCCCCAGAACTTATTTTATTAATAATTTTCTACCCTTTTTAGGCCTACGTGGCACTATTTCGTGGGCCCACCGATGGTTGACT
TTTTCTTTTAAAACTAGTGTCACGTAGGTCGAAAAGAGGTAAAAAATTACTTATAAAATAAGTTTAGGGGGTGATAGGACCTTAGTATAGTATAAATATG
TCTCTGGGATTTCGAGCATAAGTTGAGGGGATACTTGTGCATCTTCCCTAGATAAAATGTACATATTACTTCTTATGATATGTGAGTCTGACTCTTAGTT
GATTTAACAAAATTTAAAAAAATCGGGGGCTTTAACCCGGATTAACAAAAGTTTATTGTATTTTTTATAATCCGAAAAATCTTTCATTTAGAGAAAAAAA
AATAACTTTGTTAATTTTTTTTAAATTTTTTCCCCAAAATTGCATTTCAAAG
>LE_HBa0238N19_SP6_399343 (trimmed for quality and cloning vector)
TATTGGAATGATATTAGGTGGAGTTTATTAACATTTTAAGACATTATCAAAGCAACTAAAATGATGGAAATAACCCTAAAGTAAATAGGTTTGTTATATA
TTTTTGTTTAAATTAGCTTAAGTAAGTGGATTTTAGAATTTAGTTTGGTCAATATTTTGCTTTCATATTGGAGCCATTATTTCTAATGATATAAGTACTA
TGAATTTGGCAAAATGTGAAAATAAAGATGTGTGGTCTCAATCTATAAAAATAAACTATAGACAAAATTGTTCCACAAATTGAAAAGTCTAAAGCTAGCA
CAAACAAAAGTGCACAAGTACCACCTCAAATCTATGTTTGAAATCTCAAAGACATATTTATACTATGCTAAGGTCCTATTATCCCCCAGAACTTATTTTA
TTAATAATTTTCTACCCTTTTTAGGCCTACGTGGCACTATTTCGTGGGCCCACCGATGGTTGACTTTTTCTTTTAAAACTAGTGTCACGTAGGTCGAAAA
GAGGTAAAAAATTACTTATAAAATAAGTTTAGGGGGTGATAGGACCTTAGTATAGTATAAATATGTCTCTGGGATTTCGAGCATAAGTTGAGGGGATACT
TGTGCATCTTCCCTAGATAAAATGTACAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.932658
Expected error %
0.659316
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0238N19
Clone
Clone name
hba-238n19
LE_HBa0238N19
P238N19
Clone type
BAC
Contamination
none
Estimated length
98,444
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found