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Clone Read LE_HBa0222H15_SP6_399094

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0222H15_SP6_399094
Primer
SP6
ID from Seq. Facility
LE_HBa_222_H15-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
647 trimmed for vector and quality, 961 raw
Sequence
>LE_HBa0222H15_SP6_399094 (raw untrimmed)
NGAGTGTGGACTGATGCCAAGAATGCTCAATGATGGTGCCTCCTTTGAAGCAAAGAAGTTAAACAGTTGGCGTAACTGATTCTGGCACGTTTCATGTGTC
AAGAACCTCACAGCCTATAATGCAGCTAGAGGTAGCTATAGTAAGGATGAGATAGGAGGAGGAACCAAAGGTAATGTGGTGTTTGGGGATTATATTTATC
TCGTCCCTTGCTCTTCTGTAGCCAATACAGTTCCATACAGAAAATGTATAAATCACTCTAGTGAAAACCCTCGTAGTTTATTCTGCGATGAATGCCAATT
TTTAGTTTTGAAACTCATCAAGAGTTCTTTCATTGGTCATGTTTAAGGGTAAACATTACTGCCAAGGCTTGGGTTGTTATTTACAGTTATTTTACCAGTT
AATCAATCGTATTATGCAGGCGATGGTGATCTCAGAGTTGTTAATCATTTAAGATCTAGATACTGTTTTCCCCCTTTCTAATCTACCTTTATGAATCTTT
TGGAGCTTAGCTTGTTCATGTAGAACATGACCAGAATGATTATAGAAATATTCAATAATTTTCATAGCTTAAAAGTTAATTGTGTCTATTGTACAAGCAA
ATGAATGGACTACTTATGGTAAGAGTTAAGCTTTTGGATTGAGTTAGATCTAGTGTCATGTCTTTACTTGACGTTATCAAAGCCAGATATATTCATTTTT
GTTTGGGCTTCCGTTCCACAGTGTTTCAAAGGGTTAGAGAGTTGCGCTATTGGTTTGGAAATGGACTAATGATCTTATTCAGGTTTGAGGGAATGCCCTG
AGTTTGAATTCCCTGCCATATCTTTTAATAAATTTGAAACAACACCTTAGCGGGTTTTTGGTTTCCAATTTCTCTCCACGGCTCCCTTTTTTATTCTGGT
TCTCTACAGGGAAAAATACATTTGGTCCCTAAATTATTTTTCTAATGATTTCATTATATTA
>LE_HBa0222H15_SP6_399094 (trimmed for quality and cloning vector)
GATGGTGCCTCCTTTGAAGCAAAGAAGTTAAACAGTTGGCGTAACTGATTCTGGCACGTTTCATGTGTCAAGAACCTCACAGCCTATAATGCAGCTAGAG
GTAGCTATAGTAAGGATGAGATAGGAGGAGGAACCAAAGGTAATGTGGTGTTTGGGGATTATATTTATCTCGTCCCTTGCTCTTCTGTAGCCAATACAGT
TCCATACAGAAAATGTATAAATCACTCTAGTGAAAACCCTCGTAGTTTATTCTGCGATGAATGCCAATTTTTAGTTTTGAAACTCATCAAGAGTTCTTTC
ATTGGTCATGTTTAAGGGTAAACATTACTGCCAAGGCTTGGGTTGTTATTTACAGTTATTTTACCAGTTAATCAATCGTATTATGCAGGCGATGGTGATC
TCAGAGTTGTTAATCATTTAAGATCTAGATACTGTTTTCCCCCTTTCTAATCTACCTTTATGAATCTTTTGGAGCTTAGCTTGTTCATGTAGAACATGAC
CAGAATGATTATAGAAATATTCAATAATTTTCATAGCTTAAAAGTTAATTGTGTCTATTGTACAAGCAAATGAATGGACTACTTATGGTAAGAGTTAAGC
TTTTGGATTGAGTTAGATCTAGTGTCATGTCTTTACTTGACGTTATC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.956373
Expected error %
0.138747
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0222H15
Clone
Clone name
hba-222h15
LE_HBa0222H15
P222H15
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found