Clone Read LE_HBa0221N21_SP6_398175

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0221N21_SP6_398175
Primer
SP6
ID from Seq. Facility
LE_HBa_221_N21-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
730 trimmed for vector and quality, 931 raw
Sequence
>LE_HBa0221N21_SP6_398175 (raw untrimmed)
GAGATAAACTGGGACTAATCTTTTGATCTCGCCTCGACTAAATGAGTTGGAACTTCTTCTCTTTCAGTCTCTCCTCCAAAAGCATAAATATCGCCTATCT
TCATCTCATCTGCAACAAATGATTGAAAATAGATCTGCAGCACAACAAAAGCACAAAGTAGATATCAACCATTACGCGAAGCATGAGATTTACTGAAAAA
TTGTGATACCACACAAATACCTCTGGTTTTGCCCACAGTGAAATCTGACGTTTATGCATTTCAAGCTCCACTTCGGATATATACATATGATGTCTTTCAT
CAGAACTTCTCTTTTCTTCTGTGGTTGTATTGCTAATCTTGGAATAGAGACCATTTTCTACCTTCATTCGTTCAGGAAATATTTTACTGTTATCAGAATC
TCCAAATTCACCATATATATCCATATTACCACCTCGTTCTTTGCGATTCTGTTTCTGGCAAATATTCCACTTCTGTATTGCATCTACGACTAATCTTGTA
TCAACTTCAACGCCTGACTCATATGTTGTGGCCACCACAGGAGTGGTGGTTGTAAGAGAATCTAGGCCAGAACACATCCGTAAAGAATATTGTATCACGC
AGCCAGGGGAAGAAAAAACCAGCAGGTGATAATTTAATTTTAGAAAGGCTGGATCTGTATATTGGTTATGGTTTTTGTTGTAGTATTGAAAAGCTGAAGC
AATGGACCCAGATAGAGAGCTCACGTTTCCAGTAGCAGCAGCAGCAGCACCACTTAGAGTATTTTTCAACCATTACCTCCACTCCTTATCCGGCCCACAG
CAGAAAGTGTCACNAGGTGACCAGAATCACCAATGCTTTGCTGAGAATTACAGCCTTCTGAACTGCAAGCGTTGCTATCACCCAGAGCTATTAGGGCAGC
ACTACGACGTGCATCAGATGTGTGAAAATCA
>LE_HBa0221N21_SP6_398175 (trimmed for quality and cloning vector)
ATCTTTTGATCTCGCCTCGACTAAATGAGTTGGAACTTCTTCTCTTTCAGTCTCTCCTCCAAAAGCATAAATATCGCCTATCTTCATCTCATCTGCAACA
AATGATTGAAAATAGATCTGCAGCACAACAAAAGCACAAAGTAGATATCAACCATTACGCGAAGCATGAGATTTACTGAAAAATTGTGATACCACACAAA
TACCTCTGGTTTTGCCCACAGTGAAATCTGACGTTTATGCATTTCAAGCTCCACTTCGGATATATACATATGATGTCTTTCATCAGAACTTCTCTTTTCT
TCTGTGGTTGTATTGCTAATCTTGGAATAGAGACCATTTTCTACCTTCATTCGTTCAGGAAATATTTTACTGTTATCAGAATCTCCAAATTCACCATATA
TATCCATATTACCACCTCGTTCTTTGCGATTCTGTTTCTGGCAAATATTCCACTTCTGTATTGCATCTACGACTAATCTTGTATCAACTTCAACGCCTGA
CTCATATGTTGTGGCCACCACAGGAGTGGTGGTTGTAAGAGAATCTAGGCCAGAACACATCCGTAAAGAATATTGTATCACGCAGCCAGGGGAAGAAAAA
ACCAGCAGGTGATAATTTAATTTTAGAAAGGCTGGATCTGTATATTGGTTATGGTTTTTGTTGTAGTATTGAAAAGCTGAAGCAATGGACCCAGATAGAG
AGCTCACGTTTCCAGTAGCAGCAGCAGCAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.965527
Expected error %
0.286129
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0221N21
Clone
Clone name
hba-221n21
LE_HBa0221N21
P221N21
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found