Clone Read LE_HBa0221B16_T7_397066

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0221B16_T7_397066
Primer
T7
ID from Seq. Facility
LE_HBa_221_B16-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 845 raw
Sequence
>LE_HBa0221B16_T7_397066 (raw untrimmed)
ATCTCCGATCCCGGCGGTGCGCCCTTTCCGCAAGGGATGAACCCTTTAGGAGCAAAGACCCACGAGGCCACAGGCCTTTGAGAGAACAACGAGAGGGCAT
CTTATGACGGGGCGCAACGACCGTCGAAGCGAATCCAGAGGCACTGGTAACAGGTACTCGGATGAGGAGAACCGCCGGGCCATACCCAGGGTCCCCTCTA
CTAACACCTCCAATGAACCGGAACTACGCAGACGCGACGCTAACGCGGAAACGCAGACATAACTGAGTTTGCAATTCATGCGCAGACACGAACCAGCTAA
ACACGCGCGGGGATACTATCTGATAACTGGACGGTCGACAACCATAAGCCATTGATATCGCCAGACCTAAAAGGACCACAAGCGGGCGGAGAGTCCCAAG
GATCGTAGATGAGAGTCCACACCACATCGAGCGCTTCCGACACCGACAGAGACGCGAACCACAGCTAACATCTTCCATTGGAGCCCGCCTCAGA
CGCACC
AAAAAACTCGTCACAGGCTCCAGATGCAAATAAAGGAACATCAAAATTTCTACCTGCATGAATCTACCCATTACTAACCCCACGAGAAGTCCCCCAACCT
GAATCGCCAATAACTTATCAAAAAAATTGCCGCCGCCTCTTAACCTTAGTCGCCAAAAAAACGAACCTTCTTTCAACTTGCACTTCGAAGCACTCCATCC
CCTTTCAAACATAAATCAAACTGAAAAGGGCCATCCGGATAGCATCACAAACAATGGGTTAATGGGGGGCCATATGGAACCAACTAACGAAATCTCTTAA
TGATCCAAAACCGTCGACGTGACCCCTCCTTCCCCTCCAGAAAAC
>LE_HBa0221B16_T7_397066 (trimmed for quality and cloning vector)
CG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for contaminants
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.10793
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0221B16
Clone
Clone name
hba-221b16
LE_HBa0221B16
P221B16
Clone type
BAC
Contamination
none
Estimated length
37,890
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found