Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0219K15_SP6_396427

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0219K15_SP6_396427
Primer
SP6
ID from Seq. Facility
LE_HBa_219_K15-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
697 trimmed for vector and quality, 997 raw
Sequence
>LE_HBa0219K15_SP6_396427 (raw untrimmed)
GGCCGGACTGGCCCCACACTTACCCTCCTATGTGAGCGAACCAACCAACCTAAACCTTAACATTTCAATATAATATCAACATAAAGTAATGCGGAAGACT
TAAACTCATTAATAAAATCAATAACTATTATTATCCCCAAAATCTGGAAGTCATCACCACAAGAACATCTACGATCAAATGACTAAACTAAGAGTATTCT
AAAAGCTAAAAATACATAAGAAGATAGTCCATGCCGGAAGTTCAAGGCATCAAGACTTGAAGAAGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCC
TGAATTTCCGGTGTAGAAAGACTGGCTTGAGTTACTGTTGAGTCGAAGGCGACGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAG
TAGGGGTCAGTACAAAACACGGGTATTGAGTAGATATCATCGGCAAACTCAAAATAGAAAATAGTATATATCAGATAATATCATAAAATTAACTAATATC
CTTAGCATGCAGCATTTACAGTTACCATAACCCTTGGTTACAACACCAAGCACATCAATGAGGACTCACGCCTCCTCATCATACTCATTTGGGAATTAGG
TTCATTAGATTTGAATATATTATCATCTTTCAAGACTCGTTATCTTTATTCCCCTCGTGTCGGTACGTGACACTCCGCTCCTCAATATGCTATCCTGGTG
TCGGAACGTGACACCCGATCCATATTCTATCCTGGTGTCGGAACGTGAAACTCCGAATCTCATATACTATCCTGGTACCGAAACGTGGCAACCGAATCCA
ATACTAACCTGGTGTCGGAACGTGACACTCCGATCCTCATATATAACCTGGTACCGAGAGGTGGCTCCCGGATCCTATACTATCGGGTGTCGGGACGGGC
CCCCGATCCTATTATTTATACTGGTTCGGGAACGGGACCCATATCCCAAACTCAACCCTTTAGTTAGTGACCTCTTTTTTTTGCGGGATTTTTTTAC
>LE_HBa0219K15_SP6_396427 (trimmed for quality and cloning vector)
CCACACTTACCCTCCTATGTGAGCGAACCAACCAACCTAAACCTTAACATTTCAATATAATATCAACATAAAGTAATGCGGAAGACTTAAACTCATTAAT
AAAATCAATAACTATTATTATCCCCAAAATCTGGAAGTCATCACCACAAGAACATCTACGATCAAATGACTAAACTAAGAGTATTCTAAAAGCTAAAAAT
ACATAAGAAGATAGTCCATGCCGGAAGTTCAAGGCATCAAGACTTGAAGAAGAAGATCCAGTCCAAGCTAGAAGCATTAGCTCACCCTGAATTTCCGGTG
TAGAAAGACTGGCTTGAGTTACTGTTGAGTCGAAGGCGACGGCACGTTTGCTGCACTCCACAAATAAACAAGAAGAAAACATAAAAGTAGGGGTCAGTAC
AAAACACGGGTATTGAGTAGATATCATCGGCAAACTCAAAATAGAAAATAGTATATATCAGATAATATCATAAAATTAACTAATATCCTTAGCATGCAGC
ATTTACAGTTACCATAACCCTTGGTTACAACACCAAGCACATCAATGAGGACTCACGCCTCCTCATCATACTCATTTGGGAATTAGGTTCATTAGATTTG
AATATATTATCATCTTTCAAGACTCGTTATCTTTATTCCCCTCGTGTCGGTACGTGACACTCCGCTCCTCAATATGCTATCCTGGTGTCGGAACGTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.962891
Expected error %
0.217698
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0219K15
Clone
Clone name
hba-219k15
LE_HBa0219K15
C02HBa0219K15
P219K15
Clone type
BAC
Contamination
none
Estimated length
81,596
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found