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Clone Read LE_HBa0219I17_SP6_396250

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0219I17_SP6_396250
Primer
SP6
ID from Seq. Facility
LE_HBa_219_I17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
770 trimmed for vector and quality, 1013 raw
Sequence
>LE_HBa0219I17_SP6_396250 (raw untrimmed)
NNNCCAGTAGTTGCTTTGATTCCTCTACTGCTCCCACATTCCACGTACTGATCCATTTGACATGTATCCTTTCATGATGCGTACATAGGTATTTAGGATC
ATCAACATCCTTTTCGTTGATACATCCAAGAGTTAGAGTTAGCTATGACGAACCTCCTTTCTTCCAGAGGATTTCATTTACCTTTCAGTTATATTAGTTG
TTAGTATGTTGTGGGTCTTGTCCCGACTTCCATCTTTATCAGTTAGAAGCTTCATACATAGTCAGTATAGTTGAGAAGTCTGCATTATTTTTTTTACTAA
ATGTTTTAAGGACTTAAGTTGTCTATTTTATGGCTAGTTGAATATATTATTTAATTTAATATTTTTCATTTGAGTTAAGGATTTGTAATTTAGTTTCATG
GATTTATTAAGTTTTTAAGCTTTGTATGCTTAAGTTATTCTTCTACTTGTAGTCACCCCGGATGAGGGTTCGCTTGGGACCAACAATGGTTCTTGAGTGG
TGGCCACGTCCAGGGTATAGGCTCGGGTTGTGATATGTCTAGAGGACCAAATTTTGTTGCAATAAGATATTTTGGGTCTCTTATAAATGGATATAAATTT
CAAGTCAGGCAGCGTGATGCAAGGGGAAAACACAAAATAGTGGTGTTACACTAGTTGCCTCAACTACAAGCTTTGCAATATCGAAAGATAAAATTTCAAA
TGCTGGAGATTTGACTTATCATGACAGAATAGTTGATATTGTTGAGTTAAACTATTACAGTCATTTTAGGGTTGTACTATTTAAGTGCAATTGATATGAG
GGTGAAAATGATGCTTATGGGGCTACCTATGTCTATTTAACAAGAGATGCTTTCAGAAGAGCCTTTTGTGCTTGGGATCTCAGTACACCAATGCTTCTAT
GTGCAAGATCCATATGATCAAGATAGACATTATGCTATGAAGAATTTTCTGAAGGACTTATTTAACTGGGGGAGGGAATTTTATCCATCCTCCCCCAAGT
TTTGAAACGAGTA
>LE_HBa0219I17_SP6_396250 (trimmed for quality and cloning vector)
TGCTCCCACATTCCACGTACTGATCCATTTGACATGTATCCTTTCATGATGCGTACATAGGTATTTAGGATCATCAACATCCTTTTCGTTGATACATCCA
AGAGTTAGAGTTAGCTATGACGAACCTCCTTTCTTCCAGAGGATTTCATTTACCTTTCAGTTATATTAGTTGTTAGTATGTTGTGGGTCTTGTCCCGACT
TCCATCTTTATCAGTTAGAAGCTTCATACATAGTCAGTATAGTTGAGAAGTCTGCATTATTTTTTTTACTAAATGTTTTAAGGACTTAAGTTGTCTATTT
TATGGCTAGTTGAATATATTATTTAATTTAATATTTTTCATTTGAGTTAAGGATTTGTAATTTAGTTTCATGGATTTATTAAGTTTTTAAGCTTTGTATG
CTTAAGTTATTCTTCTACTTGTAGTCACCCCGGATGAGGGTTCGCTTGGGACCAACAATGGTTCTTGAGTGGTGGCCACGTCCAGGGTATAGGCTCGGGT
TGTGATATGTCTAGAGGACCAAATTTTGTTGCAATAAGATATTTTGGGTCTCTTATAAATGGATATAAATTTCAAGTCAGGCAGCGTGATGCAAGGGGAA
AACACAAAATAGTGGTGTTACACTAGTTGCCTCAACTACAAGCTTTGCAATATCGAAAGATAAAATTTCAAATGCTGGAGATTTGACTTATCATGACAGA
ATAGTTGATATTGTTGAGTTAAACTATTACAGTCATTTTAGGGTTGTACTATTTAAGTGCAATTGATATG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.947617
Expected error %
0.224246
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0219I17
Clone
Clone name
hba-219i17
LE_HBa0219I17
P219I17
Clone type
BAC
Contamination
none
Estimated length
84,827
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found