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Clone Read LE_HBa0219H11_SP6_396131

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0219H11_SP6_396131
Primer
SP6
ID from Seq. Facility
LE_HBa_219_H11-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
785 trimmed for vector and quality, 1028 raw
Sequence
>LE_HBa0219H11_SP6_396131 (raw untrimmed)
NCCGTGAGATAGCGATGAGTGGATCAATGCAGACGTCCTCATATTCAATTCTGGACAGTGGTGGGTACCTGGGAAGCTTTTTGGAGTGTAAGTGCACTTT
GTTCTTTTACTAATACAAGTTTTATTACTTCGCGACTATATATGCATAATAGCAAACTGTAGTTACCTTCATATACTGCAAAACTGTCATTGAGCTAAAC
GAACAATAACAACATCACAATTTTTGCAGTATTTGAAGGGCCTTCATGTATGGACTCCCCCTTTTAATCGTCATTCCCCTTTCCTCCTTTTTCACTTGTA
TCCGCCCTTGTTTAGCATGTGCGAGTATCCCTGTGTGTTCCACAAGAATTTGGTTGAAGTCTCAATAGGACAGGTGTTAAAGCCACTTGGAATTGGAATT
GCTCGTTCCATTGTGAGGACACATAATGCTGACCCCAACTAGCTTGGATTAAAGGGTAATTAGTAGAATTTTTTGTTCCCATAGTGAAAGAGTTCATTTT
AGGAGGTCCCTCGTGCATGAACGCATTGCTTCTATTTAGTTTCATTAGTTACCTCAAATCATTTGTTTAGGGCCTTCAAAGGTTATTAGCCACTCTCTAT
ATGAATATGCAAAAAACAGGAAGGTCTGAGGATAACGTTTGAAGCCCAAACATTTAAACTTTCCGGGAATCTTGTGTTCATTTTTGTACATCTACCACAT
TTTAAATCAAAAGCTAGCTCACACATATCAATCCCCTTAAGGTAAAAATGTCTCCGTATTTTTCATTTCTTTCATGGTGTGAATTTTAGCATTTCTGTCA
GTAGGTTTTATAAACTCTTAGGTTCTAAATAGTAAGCAAGATCAAGGAAACGTTTATGCGCTCGATAAAGCACCAGTGTTTCCTTCTTATAATCATGCAA
AAACTGGGAGGTTTGGTTTCCTGGTTCTCAAAAGATCTCTAATCTTCTTTAAAAAGGGTGGTTTTCCATCTAAATATCACTGGGATTGAATGTATCTAAA
GGAATCAAATGCCCTGTAATTTGATCCG
>LE_HBa0219H11_SP6_396131 (trimmed for quality and cloning vector)
GATGAGTGGATCAATGCAGACGTCCTCATATTCAATTCTGGACAGTGGTGGGTACCTGGGAAGCTTTTTGGAGTGTAAGTGCACTTTGTTCTTTTACTAA
TACAAGTTTTATTACTTCGCGACTATATATGCATAATAGCAAACTGTAGTTACCTTCATATACTGCAAAACTGTCATTGAGCTAAACGAACAATAACAAC
ATCACAATTTTTGCAGTATTTGAAGGGCCTTCATGTATGGACTCCCCCTTTTAATCGTCATTCCCCTTTCCTCCTTTTTCACTTGTATCCGCCCTTGTTT
AGCATGTGCGAGTATCCCTGTGTGTTCCACAAGAATTTGGTTGAAGTCTCAATAGGACAGGTGTTAAAGCCACTTGGAATTGGAATTGCTCGTTCCATTG
TGAGGACACATAATGCTGACCCCAACTAGCTTGGATTAAAGGGTAATTAGTAGAATTTTTTGTTCCCATAGTGAAAGAGTTCATTTTAGGAGGTCCCTCG
TGCATGAACGCATTGCTTCTATTTAGTTTCATTAGTTACCTCAAATCATTTGTTTAGGGCCTTCAAAGGTTATTAGCCACTCTCTATATGAATATGCAAA
AAACAGGAAGGTCTGAGGATAACGTTTGAAGCCCAAACATTTAAACTTTCCGGGAATCTTGTGTTCATTTTTGTACATCTACCACATTTTAAATCAAAAG
CTAGCTCACACATATCAATCCCCTTAAGGTAAAAATGTCTCCGTATTTTTCATTTCTTTCATGGTGTGAATTTTAGCATTTCTGT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.967616
Expected error %
0.436891
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0219H11
Clone
Clone name
hba-219h11
LE_HBa0219H11
P219H11
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found