Clone Read LE_HBa0236H12_SP6_395534

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0236H12_SP6_395534
Primer
SP6
ID from Seq. Facility
LE_HBa_236_H12-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
744 trimmed for vector and quality, 986 raw
Sequence
>LE_HBa0236H12_SP6_395534 (raw untrimmed)
NAAATCGCCNNNCCAGATGTTNNNCANCNTGNNTGAAACTTNCTAAAGAGAAGTGATTGGGCATCTCTATCCGATGTTTTGGAAAAAGGGATCTCATGAA
GAGTCACAATCTCATCAATGCTATATCTTTGCATAATCCTCCGCCGTATAAGTATATCTTAATGGGAATAAAATAAGTGGATTTTGTCAATAAATCCACT
ATCACCCAAATTGAGTCATTTTACGTTCGGGTGCGAGGCAACTCAACAACAATGTCCATGTTTATTTTGTTCCCACTTCCAAGTAGAAACACCCATTTCT
TGAACTATACCACTAGGCTTTTGATGCTCAACTTTAACTTGTTGACAATTTGGATACTTTGATACAAACTCCGGTATGTCCTTTTCAAGCCATTCCACCA
ATATAACTTTCTAAGATCACGATATATTTTGGTAGAACTCTGATGGATGCAATATCATGAACCTTGTGCTTCCTCTAACACCCTATTCCTCAAATCATTA
ATATCCAGTACACATAATCTATTTTGGTAACGTAGCACACCATCTCCCTTGTGAGAATGACTCTGACAACTTACTATGTACCAATTTCTTCAACTCCATC
AATAGTGGATCAAGATGTTGTATAGATTTCACCTCAACCACTAAGGATGACTCGAAGTTATTATGAACCACAAAATAACCATTTGAGGAATTCAAACCGC
ACACCCTATCTATCAAACCTATGAACATTTTTCACTTAGGTCATTATTCCCTTCTTCTAGATAAGACATACAACAATGGTAATACGACTCAAAGCATTCA
CAAACACAGAGAATCAATGGCCGCAAACCATCCACAAAACTCATATAGTACCTGGATAAACCCAAAAAGTTCTAATGTCTATTGGAGCCAATGGTCTAGG
AAAATTCCTAACCACATCAATTTTCTTTGATCAACCTCAATGCCCTCCCTCGAGATGAAATGGACCAAAAACGCCCCTGATCTTAA
>LE_HBa0236H12_SP6_395534 (trimmed for quality and cloning vector)
AAAGAGAAGTGATTGGGCATCTCTATCCGATGTTTTGGAAAAAGGGATCTCATGAAGAGTCACAATCTCATCAATGCTATATCTTTGCATAATCCTCCGC
CGTATAAGTATATCTTAATGGGAATAAAATAAGTGGATTTTGTCAATAAATCCACTATCACCCAAATTGAGTCATTTTACGTTCGGGTGCGAGGCAACTC
AACAACAATGTCCATGTTTATTTTGTTCCCACTTCCAAGTAGAAACACCCATTTCTTGAACTATACCACTAGGCTTTTGATGCTCAACTTTAACTTGTTG
ACAATTTGGATACTTTGATACAAACTCCGGTATGTCCTTTTCAAGCCATTCCACCAATATAACTTTCTAAGATCACGATATATTTTGGTAGAACTCTGAT
GGATGCAATATCATGAACCTTGTGCTTCCTCTAACACCCTATTCCTCAAATCATTAATATCCAGTACACATAATCTATTTTGGTAACGTAGCACACCATC
TCCCTTGTGAGAATGACTCTGACAACTTACTATGTACCAATTTCTTCAACTCCATCAATAGTGGATCAAGATGTTGTATAGATTTCACCTCAACCACTAA
GGATGACTCGAAGTTATTATGAACCACAAAATAACCATTTGAGGAATTCAAACCGCACACCCTATCTATCAAACCTATGAACATTTTTCACTTAGGTCAT
TATTCCCTTCTTCTAGATAAGACATACAACAATGGTAATACGAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.955655
Expected error %
0.119988
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0236H12
Clone
Clone name
hba-236h12
LE_HBa0236H12
C02HBa0236H12
P236H12
Clone type
BAC
Contamination
none
Estimated length
125,437
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found