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Clone Read LE_HBa0235M22_SP6_394438

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0235M22_SP6_394438
Primer
SP6
ID from Seq. Facility
LE_HBa_235_M22-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
598 trimmed for vector and quality, 857 raw
Sequence
>LE_HBa0235M22_SP6_394438 (raw untrimmed)
NCCGTGGTTAATTCATTAAGTAGTAATGCACTTCTGGTCCTTCTAGGAGCTTTGGCATTTGACCCTTTATATGCCCGATGGTTGGAAGAGCAGAACCGAC
GAATCATTGAATTAAGGGGAGCTGTTAATTCTCATGCTGGTGATGCTGAACTTCGCATAATAGTCGATGGAATACTGGCCCACTATGATGACATATTCAG
GATAAAGGGGGATGCGGCGAAGGCTGATGTTTTTCACATATTGTCGGGCATGTGGAAAACTCCTGCAGAAAGATGCTTCTTGTGGCTTGGTGGATTCCGT
TCATCTGAACTACTCAAGGTGAGAGATTTGTCTTCCCACAAGTGAATGTGCATCTTGGTGAATAGCTTTCTCCACCCTCCTTTTGGCTAAAAAATGACCA
AGATAATATAAAAAAATAAAAGCTCATATCCTTGTGAATGGAGGTTCTTTTTTCATTTTACCATAGGAAGGAACTGTAGAGAAAAAAAAATCAATTTCTG
ACCCAAGTTCTTCTTTTTTTTTTTTTAAAAAAGGAAAAGGGTCAAAAATACCCTTGAACTATCAGAAATAGCTCANATATACCCTTGAAGTATATTTCGG
CTCAAATATACCCTTACCGTCAAACTATTGGGTCAAAAATACCCTTCTCATTAACAGAATCGGTTAAATGTCACTTAGATGCCATGTGGATGTCACATGG
CATGCCACATGGGGCCAATAAATTTCCACTCATGCCCCGTAGACTAAATAAACTTACCCCTAATTTCCCCCAATTTTCCCCTTTTTCAGTAGAATTTTAA
AAACGATTTTCCTTGAAAAACATAAAAACCCCTTTTCCCCCATTTCCCCCTTTTCCT
>LE_HBa0235M22_SP6_394438 (trimmed for quality and cloning vector)
ACTTCTGGTCCTTCTAGGAGCTTTGGCATTTGACCCTTTATATGCCCGATGGTTGGAAGAGCAGAACCGACGAATCATTGAATTAAGGGGAGCTGTTAAT
TCTCATGCTGGTGATGCTGAACTTCGCATAATAGTCGATGGAATACTGGCCCACTATGATGACATATTCAGGATAAAGGGGGATGCGGCGAAGGCTGATG
TTTTTCACATATTGTCGGGCATGTGGAAAACTCCTGCAGAAAGATGCTTCTTGTGGCTTGGTGGATTCCGTTCATCTGAACTACTCAAGGTGAGAGATTT
GTCTTCCCACAAGTGAATGTGCATCTTGGTGAATAGCTTTCTCCACCCTCCTTTTGGCTAAAAAATGACCAAGATAATATAAAAAAATAAAAGCTCATAT
CCTTGTGAATGGAGGTTCTTTTTTCATTTTACCATAGGAAGGAACTGTAGAGAAAAAAAAATCAATTTCTGACCCAAGTTCTTCTTTTTTTTTTTTTAAA
AAAGGAAAAGGGTCAAAAATACCCTTGAACTATCAGAAATAGCTCANATATACCCTTGAAGTATATTTCGGCTCAAATATACCCTTACCGTCAAACTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.972388
Expected error %
0.778177
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0235M22
Clone
Clone name
hba-235m22
LE_HBa0235M22
P235M22
Clone type
BAC
Contamination
none
Estimated length
108,129
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found