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Clone Read LE_HBa0115M20_SP6_39398

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0115M20_SP6_39398
Primer
SP6
ID from Seq. Facility
LE_HBa_115_M20-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
547 trimmed for vector and quality, 899 raw
Genbank Accession
DU085559
Sequence
>LE_HBa0115M20_SP6_39398 (raw untrimmed)
GCGGGGGGTTTGATTGAGTTGAGAATGAACCAACTCAAATTATCTTGAGCCTAACCCTTAAAATTCTGGACGGGTTGAACGGGTTACCTATGTTTGGGTT
CACTTTTGACACACATAGCTTTGACTGTAATGGTGGTTTTGGTTGGTGAAGAAGAAAAGAAGCGGTCTTTGGTGGTTGGCTGGAAAATTCTCCGGCAAGG
GTGGTGGTCGGAAAAGTACAAATTCTAAAGAATTTCTTCAAGCCCTAAAAATCTAAAATTACCTCTAAATTTTATCCACTCACTACTTATTTCTTCACCT
GGTAAAACATAAATAGAAAAAATAATTATGTAATGGGCTCGAATTTTGTGGGCTTGTGATTGTGGCCCGGAATTATAGAACAATTGTGTATGCAAATTTT
GATCATATTTGAATAAATTTTTAGACTATGTTAAATTTCAACATCAATACCAACAATTAATAAAATGAATATTAAAAAATATGATGAATGTAACTAATGA
CATGTAAAAATGCAATTTTAAAATTCACTAATAAAAAATCCTAAATTTTGATAAATAAAGATAATTATTGATAAACTTATTTAAATTTTTAAGAAAATTT
GAACAATTTAAATAAAATAAAAAACTTAAAAGTTTGTGAATTTTAAAATGTTTAGGCCAAATTTAAATGTCCCACACAAACTAAAAAAATTATTGTTTTC
TTTAAAATTTTCAAAAATATACTTCCTAATAGGAAGAACTACCCATTTCTCATATAAGATTTATTTTCCTCTTTTTCAAGCAATGTTTCTATTTTAATTT
TTATTTATGAAACAATACAATCATGCACTTTTCCTCTCACTCTATATGAAAATAGAATAATTTTCAATTGAATGCATATTTACAATAACATATATTTTT
>LE_HBa0115M20_SP6_39398 (trimmed for quality and cloning vector)
CTCAAATTATCTTGAGCCTAACCCTTAAAATTCTGGACGGGTTGAACGGGTTACCTATGTTTGGGTTCACTTTTGACACACATAGCTTTGACTGTAATGG
TGGTTTTGGTTGGTGAAGAAGAAAAGAAGCGGTCTTTGGTGGTTGGCTGGAAAATTCTCCGGCAAGGGTGGTGGTCGGAAAAGTACAAATTCTAAAGAAT
TTCTTCAAGCCCTAAAAATCTAAAATTACCTCTAAATTTTATCCACTCACTACTTATTTCTTCACCTGGTAAAACATAAATAGAAAAAATAATTATGTAA
TGGGCTCGAATTTTGTGGGCTTGTGATTGTGGCCCGGAATTATAGAACAATTGTGTATGCAAATTTTGATCATATTTGAATAAATTTTTAGACTATGTTA
AATTTCAACATCAATACCAACAATTAATAAAATGAATATTAAAAAATATGATGAATGTAACTAATGACATGTAAAAATGCAATTTTAAAATTCACTAATA
AAAAATCCTAAATTTTGATAAATAAAGATAATTATTGATAAACTTAT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.913907
Expected error %
0.102835
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0115M20
Clone
Clone name
hba-115m20
LE_HBa0115M20
P115M20
Clone type
BAC
Contamination
none
Estimated length
90,140
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found