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Clone Read LE_HBa0235H23_SP6_393948

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0235H23_SP6_393948
Primer
SP6
ID from Seq. Facility
LE_HBa_235_H23-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
721 trimmed for vector and quality, 849 raw
Sequence
>LE_HBa0235H23_SP6_393948 (raw untrimmed)
ACAATTCTCTTGCTCAGTTACCTTTGTCTTTAATAGCATTAGATAACCTTTTCCAAACTTCGCCATTAAGGTGTACCTTAGCATTAGTGAGTGATTGTTG
GAACCCTTTAAATATCATTTCGTTTCTTTGGCATTATTTCTTTTTAAATAATGNAAAGAATAAAGAATGCTTGTAGGTTCATTTTCCCCAAACTATTTCT
TGTCTTATGTGAAACAAAAGTCACATTAATTAGAAAAACACTGCTTTTCTCCTTATTTTAATCGCCCTTTATTGCGCTTGTAACGAACTAGTAAAAAGGA
GTAATCGCCCTTTATTGGGCTTGTAACGAGCAAGTAAAAAGGAGTGGTCTTGCGCACATGAGAAGTGGCTTGAAGACAAAACAGATCAATGTTCCCCTGC
ATGCTGTATATATCTGAGACCTATCCCAAATCTGATTTTAAGAAAATATTTTTAGTTTTTTTTTTTAATTTACATATAAAGTATCCAAATACATGTTTAC
AAGAACATATACTGATATATTACTAAATAAATTTTGTAAGAACAGTCGATCACTATTGTAGTAGCCATTTTAATTAGTAGCTACCAAGTTAATTGTGACA
ATCAACTTAATTTTGTTACAGCTCACTAAACCCCCTTTATAACACCTCCAGAATTAACCTATATAAAGCAGACGAATTTTGACCATTTTCCTACCCTAAA
AAAATTCTCTTTTCTTCTCCAAATTTTCTCCTCTTTGTGTTATTTCTGAGCTGTGGAACCACGGAGAGCAACAGCTAACAACTATGTGCATCCTAGTAGG
ACTGAAATCGCTCTCCAAAGCCCCAACATAAGATTTGTTTTCATAAAGT
>LE_HBa0235H23_SP6_393948 (trimmed for quality and cloning vector)
CTTTGTCTTTAATAGCATTAGATAACCTTTTCCAAACTTCGCCATTAAGGTGTACCTTAGCATTAGTGAGTGATTGTTGGAACCCTTTAAATATCATTTC
GTTTCTTTGGCATTATTTCTTTTTAAATAATGNAAAGAATAAAGAATGCTTGTAGGTTCATTTTCCCCAAACTATTTCTTGTCTTATGTGAAACAAAAGT
CACATTAATTAGAAAAACACTGCTTTTCTCCTTATTTTAATCGCCCTTTATTGCGCTTGTAACGAACTAGTAAAAAGGAGTAATCGCCCTTTATTGGGCT
TGTAACGAGCAAGTAAAAAGGAGTGGTCTTGCGCACATGAGAAGTGGCTTGAAGACAAAACAGATCAATGTTCCCCTGCATGCTGTATATATCTGAGACC
TATCCCAAATCTGATTTTAAGAAAATATTTTTAGTTTTTTTTTTTAATTTACATATAAAGTATCCAAATACATGTTTACAAGAACATATACTGATATATT
ACTAAATAAATTTTGTAAGAACAGTCGATCACTATTGTAGTAGCCATTTTAATTAGTAGCTACCAAGTTAATTGTGACAATCAACTTAATTTTGTTACAG
CTCACTAAACCCCCTTTATAACACCTCCAGAATTAACCTATATAAAGCAGACGAATTTTGACCATTTTCCTACCCTAAAAAAATTCTCTTTTCTTCTCCA
AATTTTCTCCTCTTTGTGTTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.93243
Expected error %
1.16099
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0235H23
Clone
Clone name
hba-235h23
LE_HBa0235H23
C12HBa0235H23
P235H23
Clone type
BAC
Contamination
none
Estimated length
114,721
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found