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Clone Read LE_HBa0235H18_SP6_393928

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0235H18_SP6_393928
Primer
SP6
ID from Seq. Facility
LE_HBa_235_H18-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
664 trimmed for vector and quality, 804 raw
Sequence
>LE_HBa0235H18_SP6_393928 (raw untrimmed)
TTCTTTTAAGAGGCTTCNTCAAANAGGTTACTTATTTGTGAGAAGCTTTAAAGGGTGCACTCAAACAGAGTGCAGTAGTATGCACCTTTTTGAGACCCAT
GTTCATATTCCAGTAGGTACCTTAAAAAACTCATCTATCCATTCTTTAGGTGAAATAGTCGTGGCGAGTTGGATCGAACACCATCATATGTTTTGAAAAT
GAGAAGAAATAAAGAGCGTTAAGGACAAAGTTAGAGTGATTTCTTCACATCATATGTTTTGAAAATGAGAAGAAATAAAGAGCGTTAAGGACAAAGTTAG
AGTGATTTCTTCACAATAATTTCTAGATATTTGACTTGATTATCTCATAACTTGACATTGTTGTTCTGCATAATAACAAACCTTACATTGTAGCATATGA
TAAAATAATTTAACTTGAAAAATGAAAAGAAAATCCCAACATTTTTATTACAGTAACCCGTATAGACTCAAAATAGCTCTTTTCTTTTTTACTATATGAA
ATCCACACTTTTAACACTTGAAAATGTTATAACGGGTAAGATAAGTTCATAATTTAAGCAAGAACAAATTGATCAGTCGAGTAATGCTTCACATCAATAA
GAAGACTCTTTCCATCCACCAAGGTTCTCTTCTTCATACTCCCTCTCAGAATATTCCTACAAAAACATAGCAAAATATATCATGCACATAGAATACCTAT
TATACTTGCATGTTACGAGTTCCTTTATTCATATAGCCAATCTGGAACTTGTTAGCTCGGGATTGAGGGCTAAACCTTTTTTTTTTTTTTTTTTATAAAT
CAAA
>LE_HBa0235H18_SP6_393928 (trimmed for quality and cloning vector)
AGGTTACTTATTTGTGAGAAGCTTTAAAGGGTGCACTCAAACAGAGTGCAGTAGTATGCACCTTTTTGAGACCCATGTTCATATTCCAGTAGGTACCTTA
AAAAACTCATCTATCCATTCTTTAGGTGAAATAGTCGTGGCGAGTTGGATCGAACACCATCATATGTTTTGAAAATGAGAAGAAATAAAGAGCGTTAAGG
ACAAAGTTAGAGTGATTTCTTCACATCATATGTTTTGAAAATGAGAAGAAATAAAGAGCGTTAAGGACAAAGTTAGAGTGATTTCTTCACAATAATTTCT
AGATATTTGACTTGATTATCTCATAACTTGACATTGTTGTTCTGCATAATAACAAACCTTACATTGTAGCATATGATAAAATAATTTAACTTGAAAAATG
AAAAGAAAATCCCAACATTTTTATTACAGTAACCCGTATAGACTCAAAATAGCTCTTTTCTTTTTTACTATATGAAATCCACACTTTTAACACTTGAAAA
TGTTATAACGGGTAAGATAAGTTCATAATTTAAGCAAGAACAAATTGATCAGTCGAGTAATGCTTCACATCAATAAGAAGACTCTTTCCATCCACCAAGG
TTCTCTTCTTCATACTCCCTCTCAGAATATTCCTACAAAAACATAGCAAAATATATCATGCACA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.937601
Expected error %
0.428764
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0235H18
Clone
Clone name
hba-235h18
LE_HBa0235H18
C08HBa0235H18
P235H18
Clone type
BAC
Contamination
none
Estimated length
83,316
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found