Clone Read LE_HBa0217O22_T7_393883

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0217O22_T7_393883
Primer
T7
ID from Seq. Facility
LE_HBa_217_O22-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
8 trimmed for vector and quality, 915 raw
Sequence
>LE_HBa0217O22_T7_393883 (raw untrimmed)
NCCGCTACGCCCGGGGATCTCTGAGTCACCCTGCAGCATGCAAGCTTTCCTAACACCACCTATGTGCTTTGACCCACTCCTCCGGCCCTATTATGTCTCC
CTTAGGTCGCTTCATGTTTGATCTATGTCCCTGAGTTGATAGGAAGCTAGCTTTGCCCTTCTCTTTGAACTTGCCCCCCTAGCATAGAGAATCTTATAGA
AATCCTGTAGGAAGTCTTGGGAGTCCTTGTTAACCTTTGACCCCTAATACCTTGGAAGGGTCCTCCTTGGAAGTCCCTTAAGTGGGTAACATGGTACTAT
CCTTTGGTTGAACATGAAGTCTATTCTCTCCATTAGGGTGAGACGTCCTGGATTGAGTCGTTCTGGCTTGGACCTGAGTGGGTACCGCTTGAGCCTGGGT
ATTTCTGGCTTGAGACCAAGTCAAAAATTTTGACCTTATCTCTCCCCCTGGCATAGGTGGAGGAATGACCGGAGCTTGGTCTTATGGAGGCCCTTGATTG
CCCTGTGGAGCGGCTTGGTTCTCTCCAGGAGGAACTCCCCCCTTAAGCCAATCCTTCTCTACTCTCCTTGCGGCTTCCCGTCGTGTAGTCCTCTCCCATA
ATCATAAGAAAATGATTAGAAGA
GAAAGGGACCCCTAAAATTACCCTTCCTAAGAAACAACTTTCAACATTACCCAGAAGTTAGAATTCTTTATCATCCC
CTAGCCCCCCCTTTCTAAAGTTGACACCCCTTCCCCCTAGAAACAAAACCTACCTCTAGGTTTTTTTTGGGGAAATAATCCCCCCAAAACATTTCCCCCC
TGCCCTCTCCCCATTGTTTTGAACCGGGGGCACACCCTCCAATAACCTCTGGCCTCCCTCTCCTCCAGGGACAAAATAGCCCCTACGCCTTTCTCTCACC
TCCTCAAGCTATAGG
>LE_HBa0217O22_T7_393883 (trimmed for quality and cloning vector)
GAAAGGGA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
  • Not screened for contaminants
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.208351
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0217O22
Clone
Clone name
hba-217o22
LE_HBa0217O22
P217O22
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found