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Clone Read LE_HBa0217M17_SP6_393676

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0217M17_SP6_393676
Primer
SP6
ID from Seq. Facility
LE_HBa_217_M17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
847 trimmed for vector and quality, 972 raw
Sequence
>LE_HBa0217M17_SP6_393676 (raw untrimmed)
NNNCCAGTATTGACACAAAATTTGCATGCATCAAAATAAATTTTTTACCTTTATCTAAAAAGAAAATAATATAACAAAAGACTTACATAGTCCAAGTATA
GGTGGCAAGTTACCCAGCTTAGCATAGCTTATTCCTTGAGGAATAGCAAGACTAGCTATAGTAATTCCAGCAATAAGATCTGCTTTGAAGAAACCAAAAC
TGTATCTTGAACCCCATTCAAAAATTGGAAATAAATATTGAACCCCAAGTATAAATTTTCTCAAAGGTTTTTGGTTCTTGAATTGCTTAAGTGGATCATC
TGGGAATAATGTCTCCTTCAACGTATTCTTCAATGATTTGAAAAAAGGCTGTGGTGGAGGAATTTCAACTCTATGTATGCCTGTAGTATGATTATCCATC
AGTGATGGATACCCATAATTATCTGCGTTACCCATTTCCTTTCTGTTCTTTTCTTTTTTGTTTTGGATAAGTGCTTAATAGCTTTGAAAAAAGAAATTTT
GGTTGGAGTGAATAAAGGATAGTATATCGCTTGCTTTATATAGACAGGTATACCAAGCGACTGTTTCACACTTTTTTCTAGTGGCCTATTCTATGTTGTG
GCACAAAACATTAACACACCGCCATACTAATAGAAAAGAAAAATTAATTAATATAACAAAGCATAATCGGACAAATTGATAATATAAAATAAATATAATA
GCTATTCTTTGATTTATTTTCGCAAACTGACTCTCTGCCTTGTATTCTCGCTCACTTCATACAATATAAATTATGTTTTTAATTGTATACAACGAGAGAA
AATTATATATACACATGCAAATACATATATCTCCGTCCTATACACTTATAATTATATAATAAAAGTACTCTCCTGCTCAAGTCTGTTTTGCCCTTCTCTC
TTTCTCGTTTTATACAAATCAAAACGNAAAAAATTTCTAACCTTCTCGGTTTATACAAATTCAAACCTATAT
>LE_HBa0217M17_SP6_393676 (trimmed for quality and cloning vector)
TGCATGCATCAAAATAAATTTTTTACCTTTATCTAAAAAGAAAATAATATAACAAAAGACTTACATAGTCCAAGTATAGGTGGCAAGTTACCCAGCTTAG
CATAGCTTATTCCTTGAGGAATAGCAAGACTAGCTATAGTAATTCCAGCAATAAGATCTGCTTTGAAGAAACCAAAACTGTATCTTGAACCCCATTCAAA
AATTGGAAATAAATATTGAACCCCAAGTATAAATTTTCTCAAAGGTTTTTGGTTCTTGAATTGCTTAAGTGGATCATCTGGGAATAATGTCTCCTTCAAC
GTATTCTTCAATGATTTGAAAAAAGGCTGTGGTGGAGGAATTTCAACTCTATGTATGCCTGTAGTATGATTATCCATCAGTGATGGATACCCATAATTAT
CTGCGTTACCCATTTCCTTTCTGTTCTTTTCTTTTTTGTTTTGGATAAGTGCTTAATAGCTTTGAAAAAAGAAATTTTGGTTGGAGTGAATAAAGGATAG
TATATCGCTTGCTTTATATAGACAGGTATACCAAGCGACTGTTTCACACTTTTTTCTAGTGGCCTATTCTATGTTGTGGCACAAAACATTAACACACCGC
CATACTAATAGAAAAGAAAAATTAATTAATATAACAAAGCATAATCGGACAAATTGATAATATAAAATAAATATAATAGCTATTCTTTGATTTATTTTCG
CAAACTGACTCTCTGCCTTGTATTCTCGCTCACTTCATACAATATAAATTATGTTTTTAATTGTATACAACGAGAGAAAATTATATATACACATGCAAAT
ACATATATCTCCGTCCTATACACTTATAATTATATAATAAAAGTACT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.931579
Expected error %
0.0324025
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0217M17
Clone
Clone name
hba-217m17
LE_HBa0217M17
C06HBa0217M17
P217M17
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found