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Clone Read LE_HBa0235D03_SP6_393472

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0235D03_SP6_393472
Primer
SP6
ID from Seq. Facility
LE_HBa_235_D03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
771 trimmed for vector and quality, 874 raw
Sequence
>LE_HBa0235D03_SP6_393472 (raw untrimmed)
GAGTTTCCTTGATCCTAGGCATCCCCCTTGTTGTCTTGAATTCAAATGTGAAAAAATTTGACCCATTTGGGTCTCTAGCTGATTAATAGAGACTGGTGAG
AGGTCACTGTCTGATTGAGAGTCGAGACATCCTCTTTCATTTCTTTCAACACTTTGTCAGTCCTTTCAACTTTGTTGAGAATGCATGAGAGCATGTTTTC
TGTATAGTCACCCTCATATTCCTTGGACTTTTGACGCTCATAGGGGGGAACATACCTATCCTTCTCCCCTTTTCGTTCCTTCTAAGTGGCGTTATGATCA
CGTCAATATCTGTCACAGTCTCTCAAGCTTTTATCTCTATTCCAACCCTCATTTCCACCCGTTCTTATGTACTTTTCACGATAAACTCCTTCTTTATTGG
CTAGGAAATTCACTTACTCATTTTACGGACGGTGCTTCAAATTTTGCCTCATCGCTCCATCAACACCCACATCATTAACACTCTTTGTACCAACACCCAT
GACATTTTTAGCCAAGACATACAGTTGGGTCATCATCTTTACAATGTTTTAGTTTCTTTCCTGATCCTTTTCGATATGTTCTTTTGTCATTCTAAAATTG
AGAGGATAGACTTGGTCCTCGCGAGTGTACCATGCCTTATTTTATCTTGGTCATGCAGTTAAGGAGTTGAGATGCTACTTCATATGATTTTGCATTATAC
CACCAGGAAAAAGTTGATCAGCAATTCCTTTGTTCACCGAGTCGACGCTACTATAGAAGTATTACAACAACATATTATTGGGCATTCCATGAGTTGGACA
TTGCAGTTCCAATTTCGTAAACCTCAATCATATCTCATGAATTGGCTCACCTTCAAGCATTTGAAAGCTTGGAN
>LE_HBa0235D03_SP6_393472 (trimmed for quality and cloning vector)
CTAGGCATCCCCCTTGTTGTCTTGAATTCAAATGTGAAAAAATTTGACCCATTTGGGTCTCTAGCTGATTAATAGAGACTGGTGAGAGGTCACTGTCTGA
TTGAGAGTCGAGACATCCTCTTTCATTTCTTTCAACACTTTGTCAGTCCTTTCAACTTTGTTGAGAATGCATGAGAGCATGTTTTCTGTATAGTCACCCT
CATATTCCTTGGACTTTTGACGCTCATAGGGGGGAACATACCTATCCTTCTCCCCTTTTCGTTCCTTCTAAGTGGCGTTATGATCACGTCAATATCTGTC
ACAGTCTCTCAAGCTTTTATCTCTATTCCAACCCTCATTTCCACCCGTTCTTATGTACTTTTCACGATAAACTCCTTCTTTATTGGCTAGGAAATTCACT
TACTCATTTTACGGACGGTGCTTCAAATTTTGCCTCATCGCTCCATCAACACCCACATCATTAACACTCTTTGTACCAACACCCATGACATTTTTAGCCA
AGACATACAGTTGGGTCATCATCTTTACAATGTTTTAGTTTCTTTCCTGATCCTTTTCGATATGTTCTTTTGTCATTCTAAAATTGAGAGGATAGACTTG
GTCCTCGCGAGTGTACCATGCCTTATTTTATCTTGGTCATGCAGTTAAGGAGTTGAGATGCTACTTCATATGATTTTGCATTATACCACCAGGAAAAAGT
TGATCAGCAATTCCTTTGTTCACCGAGTCGACGCTACTATAGAAGTATTACAACAACATATTATTGGGCAT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.96214
Expected error %
0.0992102
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0235D03
Clone
Clone name
hba-235d3
LE_HBa0235D03
P235D03
Clone type
BAC
Contamination
none
Estimated length
77,789
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found