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Clone Read LE_HBa0115L10_SP6_39330

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0115L10_SP6_39330
Primer
SP6
ID from Seq. Facility
LE_HBa_115_L10-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
636 trimmed for vector and quality, 903 raw
Genbank Accession
DU085507
Sequence
>LE_HBa0115L10_SP6_39330 (raw untrimmed)
GGGAGATTTCGTGTGATTTCAATTTCGACTTAAAGTTAAAATTTTGAATCAGTCTTTATTAGTACTTTTTTTTTATTGAGCTTTATTCGACGTGAATCTT
GATTAGTATTTGTTGGTTCTTAAGTGGTGCCGTTGATTTGATTTTATTATTAATTATACATTTTATATTTGCAATTTTCTAATTAGACTAATCAAACAGC
CGACGGCTAAATTGTTGTTTGATTAGAATTTGGTGACTAATTATCTATATTCTACTTAAAAACAAAATTATAATCTTTGTTGATTACTATTTATTTTTGT
TTTACTTAATTGCAATTGATAAAGACCTTAATTATTCTTCAAAAATAAGATAAAATTACGTGCCGTAACCAAATATAATTCCACTTTTATATTATTCTAA
AGAACACTACACTTACATTTCCATCTCAATCATTTAAATAAATAATTAGATGCCTAATTAGAAGGGTCTACATAATAATACAAAATTTAATTATTCAAAT
TGTTTGAAATTATTTACTAAGTTCCTCATTTGGACCATAGATATAATATCCATTGCCTTGCCGACAATAATATCTCTAATTATAGAAAATTACATACCAC
GTATAATTTCGTAAATCGAATTTGAAAAATAATATATATGCAATTTTTATTCCCTATCTTGTTGATACGAAAAAAAGATTTCCCTAATTGTAAACAAAAT
ATATTGTGTATTACCTTATAAATTTGAATGTATGAAGATAATATATATATCATCCTTATTTTTTTCTTATCTTCGCCACTAGTTTATATTTATACATCGT
ACTTCTTTTAATTTTGCACAGGGAGAACATGGTGTGGAGATTGATGAGGTGGCCTCAGTCTAAGTCTCGTGTATTGAGGTTTGTTTCCCTCCTCCCTGCG
TCC
>LE_HBa0115L10_SP6_39330 (trimmed for quality and cloning vector)
TAAAGTTAAAATTTTGAATCAGTCTTTATTAGTACTTTTTTTTTATTGAGCTTTATTCGACGTGAATCTTGATTAGTATTTGTTGGTTCTTAAGTGGTGC
CGTTGATTTGATTTTATTATTAATTATACATTTTATATTTGCAATTTTCTAATTAGACTAATCAAACAGCCGACGGCTAAATTGTTGTTTGATTAGAATT
TGGTGACTAATTATCTATATTCTACTTAAAAACAAAATTATAATCTTTGTTGATTACTATTTATTTTTGTTTTACTTAATTGCAATTGATAAAGACCTTA
ATTATTCTTCAAAAATAAGATAAAATTACGTGCCGTAACCAAATATAATTCCACTTTTATATTATTCTAAAGAACACTACACTTACATTTCCATCTCAAT
CATTTAAATAAATAATTAGATGCCTAATTAGAAGGGTCTACATAATAATACAAAATTTAATTATTCAAATTGTTTGAAATTATTTACTAAGTTCCTCATT
TGGACCATAGATATAATATCCATTGCCTTGCCGACAATAATATCTCTAATTATAGAAAATTACATACCACGTATAATTTCGTAAATCGAATTTGAAAAAT
AATATATATGCAATTTTTATTCCCTATCTTGTTGAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.88794
Expected error %
0.302071
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0115L10
Clone
Clone name
hba-115l10
LE_HBa0115L10
C03HBa0115L10
P115L10
Clone type
BAC
Contamination
none
Estimated length
82,977
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found