Notice: the solgenomics has been unstable, we apologize for the inconvenience.

Clone Read LE_HBa0217C05_SP6_392709

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0217C05_SP6_392709
Primer
SP6
ID from Seq. Facility
LE_HBa_217_C05-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
822 trimmed for vector and quality, 969 raw
Sequence
>LE_HBa0217C05_SP6_392709 (raw untrimmed)
NNCCGTGTCTTCGAGCAGTGACCAATGATCTTTTCATGGTTCTTGGAAGAGATTCAGCTGCTGAGCAAGTTTCAGCCTCTCGGGATACTGAAATGTATGA
CGAAAATGATGTCTTCCTGTCTGAAACTCTTAAGAGTCACACTGATATCAGACCTGCTTCTGCTGAGACAAAGCTTCAAACAAAAGGCGAAGGGACCAAC
AAAAGGATCGGTAGGGACCTTGGGCGAAAGGCAGTTATTAAAGAACCAAAATCTAAAACTTCCGTAACCGGATCTCTTGGAAGGACCAAATCTGATACAT
CATCAAGAATCAAGAAATCACCTTCCACATTTCAGAAGAGCAAAGCTGACAAGGTATGAACAATCTTGTACTAAATATATACTTTTTCCTGTTCTTTTCA
CCTGTCATTGTTATTATTATGATAATTTAATTCTCTCTCAACGTTACTAACAGGACGAGGAGAGTCGAAAGAAATTAGAACAATCATTATTGCAACGTCA
AAAGAGAATCGCAGAAAGAAGTGGTGCCACTGGTTTAACCAAACCAACATCAAGGAAGAATCCAGCCACATCTTCAACAATTGAGAAATCAAAACCTGAG
GCAACCAATAGATTACAAAAAACAGTTTTTAAGAGTTCCACTATAGAGCGTCTCGCGTCTACAACTACAAGGACAGCTAAGGATCGATCCACTGACTCAA
AAACCACTCCAAGCAGGAAAGCAAGTCGAAAGGAGAACAAAGTGATTGCTCCAACAAAGAAATCAGCTGGAAAAGAGAGTACTAAGCAAGGTCCCCGTAA
GTCCAAGCCTTCGGATACTAAAAGCCACTCTTCATCTGAACCTCCTCAGAAGGAAAAAGATAGNCACACTGGGAGTAACTCAATGTTAAACGAACGTGGA
GCAGAACTGAGTCCACCAGTATCTAGTGAAGTCGTTTATGCTAAGAACCCGGAGGAAGTACGTAGCATA
>LE_HBa0217C05_SP6_392709 (trimmed for quality and cloning vector)
AATGATCTTTTCATGGTTCTTGGAAGAGATTCAGCTGCTGAGCAAGTTTCAGCCTCTCGGGATACTGAAATGTATGACGAAAATGATGTCTTCCTGTCTG
AAACTCTTAAGAGTCACACTGATATCAGACCTGCTTCTGCTGAGACAAAGCTTCAAACAAAAGGCGAAGGGACCAACAAAAGGATCGGTAGGGACCTTGG
GCGAAAGGCAGTTATTAAAGAACCAAAATCTAAAACTTCCGTAACCGGATCTCTTGGAAGGACCAAATCTGATACATCATCAAGAATCAAGAAATCACCT
TCCACATTTCAGAAGAGCAAAGCTGACAAGGTATGAACAATCTTGTACTAAATATATACTTTTTCCTGTTCTTTTCACCTGTCATTGTTATTATTATGAT
AATTTAATTCTCTCTCAACGTTACTAACAGGACGAGGAGAGTCGAAAGAAATTAGAACAATCATTATTGCAACGTCAAAAGAGAATCGCAGAAAGAAGTG
GTGCCACTGGTTTAACCAAACCAACATCAAGGAAGAATCCAGCCACATCTTCAACAATTGAGAAATCAAAACCTGAGGCAACCAATAGATTACAAAAAAC
AGTTTTTAAGAGTTCCACTATAGAGCGTCTCGCGTCTACAACTACAAGGACAGCTAAGGATCGATCCACTGACTCAAAAACCACTCCAAGCAGGAAAGCA
AGTCGAAAGGAGAACAAAGTGATTGCTCCAACAAAGAAATCAGCTGGAAAAGAGAGTACTAAGCAAGGTCCCCGTAAGTCCAAGCCTTCGGATACTAAAA
GCCACTCTTCATCTGAACCTCC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.95978
Expected error %
0.200552
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0217C05
Clone
Clone name
hba-217c5
LE_HBa0217C05
P217C05
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found