Clone Read LE_HBa0234K17_SP6_392622

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0234K17_SP6_392622
Primer
SP6
ID from Seq. Facility
LE_HBa_234_K17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
688 trimmed for vector and quality, 987 raw
Sequence
>LE_HBa0234K17_SP6_392622 (raw untrimmed)
GCCCCCAGAATTATTGNTTCTTATAGTTTTGGATCTTCCCATTATTTTTGGTTATTCATAGTTGAACTATTTGTAAATGTTGGGATTTAAATTTGTTGGT
TCGCTCACCTTGTAGGTTAAGTGTGAGTGATACTCACGACTCGTTATGGGTCGTGACGTTTTAATTCTCAATTTTAGTGAGTTTTTATCCTTAATCTAAT
TTCTCATTACCAGAATTGTAACTAATTGAAAATTCTTAATATTTAGCTTTACTCTTTTGATACTTGGGAGATGCAAAATGATTTTGTCAAGAACAATTTA
AAATGCGGCCCTTTTCTTATGAAACCTACTCTCCCCTTTTTTTTTCCACTTTTATTTCTTTGCTATTTTTTTTTATTGTTGGGTTTACTTCATCTTGCTA
TGTTTGTCAATTTTAGTGATATTTTCTTATATGAAAGAAGACCCAAATTTTTTATATGATGAAGTATTGAAACGCATGCATGAAAAATCGGACAGATTGG
TCCAAATTTTTTGAAGGATCTGCAACACTATTTTCCTATGTTTGCATTGTTTACTTTCTGCTGATGAATTTACTTCAAATTTCCAAACTCTCTTTTTTGA
TTTTTTGTTGAAATATGCTGATTTTGATGGTAAACCTTATTTTAATTCTAAGCATTGATATTGGAGGTTTTTTAAAGTGAGAGTTCCTTGAAGTGAATCC
AAGGAAATTCTATTAATACTTACACGACGAAATCTCACAAAATCTTAATTTAATTTTTTAGATTTATTCAAGAAAAACATACTTCTCATCACTAGGATTA
GTGATGTAGCTTAATAATTTTCTATAATATGGAATATCTGGACGAGTCCAAAGTATTGATGTCAAAAATGTCCTTATTTTAAAAATAATAAATATTCCGA
AATAATTATATTTTCTCTCCCATAATTACCTATTTTTCCCCCCCCTAAACATTACAAATTTTTCCAAATTAAGGAATTGGATAGAAA
>LE_HBa0234K17_SP6_392622 (trimmed for quality and cloning vector)
GTTTTGGATCTTCCCATTATTTTTGGTTATTCATAGTTGAACTATTTGTAAATGTTGGGATTTAAATTTGTTGGTTCGCTCACCTTGTAGGTTAAGTGTG
AGTGATACTCACGACTCGTTATGGGTCGTGACGTTTTAATTCTCAATTTTAGTGAGTTTTTATCCTTAATCTAATTTCTCATTACCAGAATTGTAACTAA
TTGAAAATTCTTAATATTTAGCTTTACTCTTTTGATACTTGGGAGATGCAAAATGATTTTGTCAAGAACAATTTAAAATGCGGCCCTTTTCTTATGAAAC
CTACTCTCCCCTTTTTTTTTCCACTTTTATTTCTTTGCTATTTTTTTTTATTGTTGGGTTTACTTCATCTTGCTATGTTTGTCAATTTTAGTGATATTTT
CTTATATGAAAGAAGACCCAAATTTTTTATATGATGAAGTATTGAAACGCATGCATGAAAAATCGGACAGATTGGTCCAAATTTTTTGAAGGATCTGCAA
CACTATTTTCCTATGTTTGCATTGTTTACTTTCTGCTGATGAATTTACTTCAAATTTCCAAACTCTCTTTTTTGATTTTTTGTTGAAATATGCTGATTTT
GATGGTAAACCTTATTTTAATTCTAAGCATTGATATTGGAGGTTTTTTAAAGTGAGAGTTCCTTGAAGTGAATCCAAGGAAATTCTAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.909101
Expected error %
0.32336
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0234K17
Clone
Clone name
hba-234k17
LE_HBa0234K17
P234K17
Clone type
BAC
Contamination
none
Estimated length
119,799
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found