Clone Read LE_HBa0234G07_SP6_392186

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0234G07_SP6_392186
Primer
SP6
ID from Seq. Facility
LE_HBa_234_G07-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
719 trimmed for vector and quality, 1022 raw
Sequence
>LE_HBa0234G07_SP6_392186 (raw untrimmed)
GCCCNNCCGAACGTCNANNANAATGAAAGANAGAAATAAGTTTCCGGCTTGAAAATATGAAGAAGAGAAAAAAAGAAAGCTTTTCTTGAAAAAGTAAAGG
AGGGAAAAGTTAGGGTTTTTTCAGTGTTTCTTGATAAAGAACTCTAAGTGGCAGAAACAAAGGATTTCTTGAAATAAGTGTACTTTTTTATGAAATAAAT
TATAATTATGCAGTTGTTTAGTGTGTATGTATATATATGTACATAACTTTAGTTTTAGGGAAAATACATCATATCCCCCCTGAAATTGGTAGCAAAACTT
ACTTTAGTACTTTAACTACACGTGCGTTTAAATATCCCCGTAACATCTTTTAACTATATTAAATACAACACTGAGAGTAGAATACCACTCTCACCTGCCA
CATCATATCCATGTATGCACCACGTCACAGCCATGCAAGCACCACGTAATTTTTATTTTTTTTTACATATTCACCTTTTTTGTTTCTTAAATTCATTACA
CTAATCAATTAAATAAAAATACATTTTAAAATCAAATTGCCACATCTTCTTCAACCCCCCTCTTTCTTTCTTTCTTGATTTTCACCATTTTCAACCTTCA
CTAGCTTTTTATTCCCCGAATTTTCAACCTTCAATGGTTGTTTTCTTATTCAACATTCATCAAATACTTACTTTTTCTTCTTGGAACCGTTTCTCCCCGA
CAAATTTTTCCATTGAAGAATCATATTTTTTTAAAATTATTTTTTCTTAACAACTTAATGAAAAATGAAGATTGTGTAAAAAATTTGATAAACCCCCATT
TTTTTGCATCACAACTAAAATAATTCAAATAGGTTACTTAAAAATCCAGAAAGTTTGCATTCAAAAATAAGAATTGGGTGGTTGAATTTTCATGATTAAA
GAAAAAACGGATGAGGCCAAGGGATGAAAAATAAAAATACAGGTAAAAATTTTATTTTGAAAAAAAAAAGGTTTAAAAATGGTTTCCATGGGGGAAAAAA
CATTTTGGGAAAAACCCCAAAA
>LE_HBa0234G07_SP6_392186 (trimmed for quality and cloning vector)
AAATAAGTTTCCGGCTTGAAAATATGAAGAAGAGAAAAAAAGAAAGCTTTTCTTGAAAAAGTAAAGGAGGGAAAAGTTAGGGTTTTTTCAGTGTTTCTTG
ATAAAGAACTCTAAGTGGCAGAAACAAAGGATTTCTTGAAATAAGTGTACTTTTTTATGAAATAAATTATAATTATGCAGTTGTTTAGTGTGTATGTATA
TATATGTACATAACTTTAGTTTTAGGGAAAATACATCATATCCCCCCTGAAATTGGTAGCAAAACTTACTTTAGTACTTTAACTACACGTGCGTTTAAAT
ATCCCCGTAACATCTTTTAACTATATTAAATACAACACTGAGAGTAGAATACCACTCTCACCTGCCACATCATATCCATGTATGCACCACGTCACAGCCA
TGCAAGCACCACGTAATTTTTATTTTTTTTTACATATTCACCTTTTTTGTTTCTTAAATTCATTACACTAATCAATTAAATAAAAATACATTTTAAAATC
AAATTGCCACATCTTCTTCAACCCCCCTCTTTCTTTCTTTCTTGATTTTCACCATTTTCAACCTTCACTAGCTTTTTATTCCCCGAATTTTCAACCTTCA
ATGGTTGTTTTCTTATTCAACATTCATCAAATACTTACTTTTTCTTCTTGGAACCGTTTCTCCCCGACAAATTTTTCCATTGAAGAATCATATTTTTTTA
AAATTATTTTTTCTTAACA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.916072
Expected error %
0.330724
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0234G07
Clone
Clone name
hba-234g7
LE_HBa0234G07
P234G07
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found