Clone Read LE_HBa0216N06_SP6_391510

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0216N06_SP6_391510
Primer
SP6
ID from Seq. Facility
LE_HBa_216_N06-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
791 trimmed for vector and quality, 988 raw
Sequence
>LE_HBa0216N06_SP6_391510 (raw untrimmed)
GGGGGCGATTTATTAGCTTTTATGTTGATCCATATGGAGTCGGTTCCTAGCCCTGGTATTGGCAATCTGTTTAATGACAGAGACGAATTCGAGATTTTAA
AGACAGTAAATAAAATTGAACTAGTTGATCAATGAGTGCCCTCTAAAGGCTTATTAGTGTTCAGGGTGTCACGTTAATTATATAATCATTTTCAAGGTAT
ATACAAATGTGCAAGAAAATCTTTACATAGGTAATAAGTGTAGGCCGAACTCATAAGCAGATCCCTAAAATTGTTGGATTTTTTCTTTCAGGTATCTCAA
CTACGTCGTTTTCCTATTGAATCATTGAATTACCCATAATTTGTTCCTTATAAACATTGTTGGCTGATTTTGATCGGCTTTTCTAGTGTAAATGCCTTCA
ATTGTGTTCATATTGTAATGATTCTGATTGAAGGAATGAAGACAAACTGTGTTAGTCTCATTTGTTTTCTACTGTGTTCAGATGACTTGAAGTAAAACAC
AATTATTCTTGAACATTTTCACTATCAATTGGACTAATGAGTTCTGGAACAACATATGTATGCTCTATCAATATCCCTCACAAAATCTGTTTCCACATCA
GCAAACAGTGTTTAAAAGGAAAAAATTATGGATGGTTCAATGATTCAATAGGAAAATAGCATAAGTGAGATACCTGAGAGAAAAAACTCGACAAGATTAG
GGATCAATTTATATATTTGGCCGTAAGTGTATATTTTTGTATATCTAAAGTAAAATCCATCAACAGAGATATACTTGACACTGAACTACACTTTTACCAA
CCCTAAACCCTGGAATCACTGTGAATCCCATACGAAGTTCAGTTTCTGATGATCCGTTGGACATAAAGAATGCTTTTTCTCCGTTCACACTTTCAATGTA
AACGTCTGAATATCTACAACCTTTCCTTCCTTGAAAAAAATCGAAGCTTGTGGGGCTAAAGAAAAAGGCAAGACAATGAAACCACCCN
>LE_HBa0216N06_SP6_391510 (trimmed for quality and cloning vector)
TTTTATGTTGATCCATATGGAGTCGGTTCCTAGCCCTGGTATTGGCAATCTGTTTAATGACAGAGACGAATTCGAGATTTTAAAGACAGTAAATAAAATT
GAACTAGTTGATCAATGAGTGCCCTCTAAAGGCTTATTAGTGTTCAGGGTGTCACGTTAATTATATAATCATTTTCAAGGTATATACAAATGTGCAAGAA
AATCTTTACATAGGTAATAAGTGTAGGCCGAACTCATAAGCAGATCCCTAAAATTGTTGGATTTTTTCTTTCAGGTATCTCAACTACGTCGTTTTCCTAT
TGAATCATTGAATTACCCATAATTTGTTCCTTATAAACATTGTTGGCTGATTTTGATCGGCTTTTCTAGTGTAAATGCCTTCAATTGTGTTCATATTGTA
ATGATTCTGATTGAAGGAATGAAGACAAACTGTGTTAGTCTCATTTGTTTTCTACTGTGTTCAGATGACTTGAAGTAAAACACAATTATTCTTGAACATT
TTCACTATCAATTGGACTAATGAGTTCTGGAACAACATATGTATGCTCTATCAATATCCCTCACAAAATCTGTTTCCACATCAGCAAACAGTGTTTAAAA
GGAAAAAATTATGGATGGTTCAATGATTCAATAGGAAAATAGCATAAGTGAGATACCTGAGAGAAAAAACTCGACAAGATTAGGGATCAATTTATATATT
TGGCCGTAAGTGTATATTTTTGTATATCTAAAGTAAAATCCATCAACAGAGATATACTTGACACTGAACTACACTTTTACCAACCCTAAAC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.947906
Expected error %
0.37494
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0216N06
Clone
Clone name
hba-216n6
LE_HBa0216N06
P216N06
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found