Clone Read LE_HBa0233O14_SP6_391420

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0233O14_SP6_391420
Primer
SP6
ID from Seq. Facility
LE_HBa_233_O14-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
704 trimmed for vector and quality, 963 raw
Sequence
>LE_HBa0233O14_SP6_391420 (raw untrimmed)
GTTGGAGCTGTCNNTNTCTTGTTTACCTCCATGTATTCCGAGTGAATTGGTTGAGGTTATTTTTCTCTGTATTTTGTACTCTCATATTTATAGTGGATTG
CTCGTCTCCTTTGTGGACGTAGGTCGATTGACCGAACTACGTTAAATCTTTGTGTCTTTTGGTATATTTCTCGTTGTCTTCTTACTCATGATCTTTTGAG
GTTTACTTTGCTAGCTTCCGCGTTTACACCTGCTTATTTTCGGTCCTAACAATGTGTTACATACAAACTTCAAAAGAAACCATTTATTTCATGAAAATTG
GATACAACAATAATTAAAAGGGGCAATTACTAGCCTCCATTCCAACCAAATAGAGTAAAAAATACACTTCTTTTAAAATAAGCAACTAGTAGTACTACAA
GCATACAAATAACAAAATACCAAACACAGAAAGAAACTAATTTTGTCTTAAGCACATTGGAAGTTCTTGGGTGCATATTTGCCACAATTGTTGAGCAACA
AGCTAAGGGAAAGTGGAACATTTAGATTAATTCCCAACACATTGGCTTTAAGGGCAGTGCAAAGGCAGACAGCAGCATCAAGGTCAACAAGTCCTTCAAT
TAAAGAGCAACATTGAGTCTTGGCTGGACTACTTCCAACAACAAGGTGCAATAAATCACCCAATAAATTGGCACAAGCATTTAGTTTTAGTGTGTCCTTT
GGGCACTTACCCTTTGATGATGGGGTGGAGGGGGTAGGGGTTNNNNNNNNNNNNNNNNNNNTNNNNNTNNNNNTNNTTNNTTTTTNNTTTTTTNTAANTT
TTTTTTTTTTTTTNTTTTTTTTNTTTNNTTTTTTTTTNTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTNTTTGTNTTTTTTTTTTTTTTTTTTTTTT
TTNTTTTTGTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTNNTTTTTTTTTTGTTTTTTTTN
>LE_HBa0233O14_SP6_391420 (trimmed for quality and cloning vector)
ACCTCCATGTATTCCGAGTGAATTGGTTGAGGTTATTTTTCTCTGTATTTTGTACTCTCATATTTATAGTGGATTGCTCGTCTCCTTTGTGGACGTAGGT
CGATTGACCGAACTACGTTAAATCTTTGTGTCTTTTGGTATATTTCTCGTTGTCTTCTTACTCATGATCTTTTGAGGTTTACTTTGCTAGCTTCCGCGTT
TACACCTGCTTATTTTCGGTCCTAACAATGTGTTACATACAAACTTCAAAAGAAACCATTTATTTCATGAAAATTGGATACAACAATAATTAAAAGGGGC
AATTACTAGCCTCCATTCCAACCAAATAGAGTAAAAAATACACTTCTTTTAAAATAAGCAACTAGTAGTACTACAAGCATACAAATAACAAAATACCAAA
CACAGAAAGAAACTAATTTTGTCTTAAGCACATTGGAAGTTCTTGGGTGCATATTTGCCACAATTGTTGAGCAACAAGCTAAGGGAAAGTGGAACATTTA
GATTAATTCCCAACACATTGGCTTTAAGGGCAGTGCAAAGGCAGACAGCAGCATCAAGGTCAACAAGTCCTTCAATTAAAGAGCAACATTGAGTCTTGGC
TGGACTACTTCCAACAACAAGGTGCAATAAATCACCCAATAAATTGGCACAAGCATTTAGTTTTAGTGTGTCCTTTGGGCACTTACCCTTTGATGATGGG
GTGG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.962242
Expected error %
0.0297098
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0233O14
Clone
Clone name
hba-233o14
LE_HBa0233O14
C08HBa0233O14
P233O14
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found