Clone Read LE_HBa0233G16_SP6_390648

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0233G16_SP6_390648
Primer
SP6
ID from Seq. Facility
LE_HBa_233_G16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
738 trimmed for vector and quality, 981 raw
Sequence
>LE_HBa0233G16_SP6_390648 (raw untrimmed)
NNNAACGTGTAGAGAGTCCTCCTCCTTATGAGAGTTGACTTCTCCTGCATATTGGTTTATCAGCTGGATTACTGTATGGCATTACATGAGTAGATTGTCC
AGCAGAATGGACCTGAACACTTTCTAGTCGCTGAGAACTATAAGAGCACTTCTCCAAACGATTATCTTCGTCAGATTTGCTATTTTGAACAGCAATATGT
TGCCTATTCCAGTACGTCTTCCTCTGCTCCAATAGTTCCCTTGCAGCACAGACAAAGGGAAGTTTCTCCAAGTCATCAACTAAGCCTGAATCAGCTCTAG
CTAACCAACTATCAAGATCAGACATTGCCTCTCGAACAGAAAGGTCGACATCGGACGTAAATATGAATTTAGAGAATAACTTTTGAACCTCCTCTCTACC
AACAATGCCATCATTATTTTTCAAAGATAAAGTAAATGAATCCTTGTGACGGGTTAAGAGTAAAAATTCAATTACATCACTGACACGATGTTGTTTAACG
TTCTCAATTTGAATGGTGTACAAATCCTGTGAAGATATCATCATAAAACACAAAGGGCATTTCTTCTTGAAATTATTTTTATGGTCATCTTCTTCGGAGA
TCATAAAATATTGCATAACACAGGGAAAACAGAAGATATGACCACACGAAGTTATCTGAGGACAAAGAGGATCCTCTAAGCATATGGGGCATTGCACATG
AAATGGAGTGGAATATCTCACACAAACAATATCCTCCCACTGTAACATTTTGTCTGGATCCATCGAGTCAGGCGTGTAATTGCCTGAATCCAACAGAACA
AACTTGTAATTTGCTTGAAGAAACAAGTCCTTGTTGTAAGGCTTTCCCTTGACGTATCTCCTAGGAGGAGGCCACCTAGATTGTTGAACAAAAAATGGGA
TCATATTGAAAAATGACCAAGTGGTTTCCCCCTAACCTTCTGGGTTCTTCTTGAAGCTGAACGGGGTAACAACTCCCTTGG
>LE_HBa0233G16_SP6_390648 (trimmed for quality and cloning vector)
GAGAGTTGACTTCTCCTGCATATTGGTTTATCAGCTGGATTACTGTATGGCATTACATGAGTAGATTGTCCAGCAGAATGGACCTGAACACTTTCTAGTC
GCTGAGAACTATAAGAGCACTTCTCCAAACGATTATCTTCGTCAGATTTGCTATTTTGAACAGCAATATGTTGCCTATTCCAGTACGTCTTCCTCTGCTC
CAATAGTTCCCTTGCAGCACAGACAAAGGGAAGTTTCTCCAAGTCATCAACTAAGCCTGAATCAGCTCTAGCTAACCAACTATCAAGATCAGACATTGCC
TCTCGAACAGAAAGGTCGACATCGGACGTAAATATGAATTTAGAGAATAACTTTTGAACCTCCTCTCTACCAACAATGCCATCATTATTTTTCAAAGATA
AAGTAAATGAATCCTTGTGACGGGTTAAGAGTAAAAATTCAATTACATCACTGACACGATGTTGTTTAACGTTCTCAATTTGAATGGTGTACAAATCCTG
TGAAGATATCATCATAAAACACAAAGGGCATTTCTTCTTGAAATTATTTTTATGGTCATCTTCTTCGGAGATCATAAAATATTGCATAACACAGGGAAAA
CAGAAGATATGACCACACGAAGTTATCTGAGGACAAAGAGGATCCTCTAAGCATATGGGGCATTGCACATGAAATGGAGTGGAATATCTCACACAAACAA
TATCCTCCCACTGTAACATTTTGTCTGGATCCATCGAG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.970226
Expected error %
0.0658973
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0233G16
Clone
Clone name
hba-233g16
LE_HBa0233G16
C02HBa0233G16
P233G16
Clone type
BAC
Contamination
none
Estimated length
91,343
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found