Clone Read LE_HBa0216B16_SP6_390414

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0216B16_SP6_390414
Primer
SP6
ID from Seq. Facility
LE_HBa_216_B16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
792 trimmed for vector and quality, 1012 raw
Sequence
>LE_HBa0216B16_SP6_390414 (raw untrimmed)
NNNCCCGTAGNATCTTATGTCTGGTTGACGAGCTTAACCCTGCAACTATGGCGTAGTCAAAACTAGGGTTTAAGAGGATCGATTAATTGACCAATTAGAT
TGGGGATATTGTTGTAATTTCGGTGCCGCCTTTTGTCGAACATTTCTTGTGAAGGGAGTAACCGGATTTGGGCCGAATTGGTAAGTGTTTGAATGCAGCC
CAAACTAACTTAACGTAGATGTGAATTGTTTTTAGGGAAAATTGTATATAATAGCAAACTAATAACCTAAAACAAATGGAATAGCTAGGGTTAGATTTAA
TTGTGCTCTATAGCAAACATTAGCTTAAATTTTTCAGCGTCTCTCTCCCAAAAATCTCGCTCGCCACTCTCCATTCTCGCTCGGCTCTCTCGCTTTATAC
ACAGAAGTGTATAATTCTGTTTCTGTTTTGTATAAAGCGAGAGAAAATTGTATATACACATGCAAAATTGTATATCTTCCTGTTATACACTTAATTATAA
AATTTACAAACATTTTACTTCAAATATTGCAGAGAAAAAGGCCAACGAATTATACAATTGTGAATTATACAATTACAGTGAAATACAATTTTCTCTAGTT
TTATACAACAGAAGTATATATATTGTGTTTTTGTTTTTTGTATAAAGCAAGAAAAATATATATCTTCTTGCTATACACTTATAGTTATGCAATATACATA
CATTTTAATTCGATTCAACTGTATGCAAAGCAAATTATACAATTGCAGCGAAATAGGCCAGCAAATTATACAATTTAGGCCAGCAAATTATACAATTGTA
CATGTATAGCAAATTATACAGTTTTATGTTTGCTATGGAGTGCAATTATGCAAACTTTGCTATAGCATACAAAAATAAATTTTTTTTTTGCGCCCTGTGG
AAAGTTGAAAAAAAATTTTAAAAAGAAAAAAAACCCCCTTCTTTTTTTTCTCAACCCCAAACGCGGAAAACTAATTCTCCCTCTCCAAACCATGTTTTTT
TTTTTTATTACC
>LE_HBa0216B16_SP6_390414 (trimmed for quality and cloning vector)
TGACGAGCTTAACCCTGCAACTATGGCGTAGTCAAAACTAGGGTTTAAGAGGATCGATTAATTGACCAATTAGATTGGGGATATTGTTGTAATTTCGGTG
CCGCCTTTTGTCGAACATTTCTTGTGAAGGGAGTAACCGGATTTGGGCCGAATTGGTAAGTGTTTGAATGCAGCCCAAACTAACTTAACGTAGATGTGAA
TTGTTTTTAGGGAAAATTGTATATAATAGCAAACTAATAACCTAAAACAAATGGAATAGCTAGGGTTAGATTTAATTGTGCTCTATAGCAAACATTAGCT
TAAATTTTTCAGCGTCTCTCTCCCAAAAATCTCGCTCGCCACTCTCCATTCTCGCTCGGCTCTCTCGCTTTATACACAGAAGTGTATAATTCTGTTTCTG
TTTTGTATAAAGCGAGAGAAAATTGTATATACACATGCAAAATTGTATATCTTCCTGTTATACACTTAATTATAAAATTTACAAACATTTTACTTCAAAT
ATTGCAGAGAAAAAGGCCAACGAATTATACAATTGTGAATTATACAATTACAGTGAAATACAATTTTCTCTAGTTTTATACAACAGAAGTATATATATTG
TGTTTTTGTTTTTTGTATAAAGCAAGAAAAATATATATCTTCTTGCTATACACTTATAGTTATGCAATATACATACATTTTAATTCGATTCAACTGTATG
CAAAGCAAATTATACAATTGCAGCGAAATAGGCCAGCAAATTATACAATTTAGGCCAGCAAATTATACAATTGTACATGTATAGCAAATTAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.947408
Expected error %
0.412776
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0216B16
Clone
Clone name
hba-216b16
LE_HBa0216B16
P216B16
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found