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Clone Read LE_HBa0215L09_T7_389014

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0215L09_T7_389014
Primer
T7
ID from Seq. Facility
LE_HBa_215_L09-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
8 trimmed for vector and quality, 1020 raw
Sequence
>LE_HBa0215L09_T7_389014 (raw untrimmed)
NCGCTACGACGGGGATCTCTGAGTCGACTGCAGGCATGCAAGCTTGAGTATTATATAGTGTCACCTATTTAGATTGGCGTAATCCTGGTCATAGCTGTGT
CCTGTGTGAAATTGATATCAGCTCACAATTCCACACAACATACAAGCCGGAAACAGTAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACA
TTAATTGCTTTGCGCTCACTGCACTGCTTTCCAGTCAGGAAACCTGACGTGCCAACTGCATTAATGAATCGGCCAACGCGAACCCCTTGCGGCCGCCCGG
GCCGTCGACCCACTCCCATGTATGACAGCTAAAAAGCAAATTGCATGGGGGCATCCGCTTATGAACACATATTCTAGTCTATGCACCCATGCTGCATAAA
GCCCCTATATCTGCCATAAAAACAATACGCCCCGCGCTGCCACACAGCAAACCAGAGGTGACAGTCATTGATCCTTCAGCCAACATGAAAACAAACTGTA
ACGGCATGATCACCCAGAATCATCTCCTTGATCCGTACCTTGTCCCCCTGGTTCTAATACTTGCCCATGAGAAAACCAGAGGCGAATATCTCCCCCATAA
TGACCTCACCTCAATCGAAACTCGTGAAACGCACTCATTGGATTGACACAGAGCGATATCATCTTCTCAAAAGGCTCTCTGTCGAGATAAGCCACATTTT
CGTTGAATCACACCGTTTCTTGCGAACATAAGTGTAGAAACTGTCCGAAAACTTCATCGTATTTCTTGCCGATACGATAAATACAATTTCTTTGGCTTTC
GCTAACCTTCGGAACTCTGGGAGACGCTNTCCTAATTTTGTCCATGCAACCCATTGTTTCTTAATGCGAAAATTACGCATGAACATTCTGCTTGAGGGCT
CAACTGTCAAAAAAGGCCGCATGAACCTGCGACATGTTTCCTTTACGGACATTAAAATTGCCATGAAATCCAACTTAAACGATCTGTTTCCTTCTCCCCA
ACCAATGAAGGAAAAACCTT
>LE_HBa0215L09_T7_389014 (trimmed for quality and cloning vector)
GGCATGCA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
  • Not screened for contaminants
Quality Report
Processed by
SGN
Vector signature
5' read, short insert
Quality trim threshold
14.5
Sequence entropy
not recorded
Expected error %
0.856712
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0215L09
Clone
Clone name
hba-215l9
LE_HBa0215L09
C12HBa0215L09
P215L09
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found